Baudoinia panamericana: BAUCODRAFT_35355
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Entry
BAUCODRAFT_35355 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
bcom
Baudoinia panamericana
Pathway
bcom03008
Ribosome biogenesis in eukaryotes
bcom03013
Nucleocytoplasmic transport
bcom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BAUCODRAFT_35355
03015 mRNA surveillance pathway
BAUCODRAFT_35355
03008 Ribosome biogenesis in eukaryotes
BAUCODRAFT_35355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_35355
03009 Ribosome biogenesis [BR:
bcom03009
]
BAUCODRAFT_35355
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
BAUCODRAFT_35355
mRNA cycle factors
Stress granule specific factors
BAUCODRAFT_35355
Ribosome biogenesis [BR:
bcom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
BAUCODRAFT_35355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_4
LRR_8
RRM_9
LRR_9
UBA_4
Ribosomal_S5_C
Motif
Other DBs
NCBI-GeneID:
19112681
NCBI-ProteinID:
XP_007677467
JGI:
Bauco1_35355
UniProt:
M2MUW6
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MVARSKPPRAAPRGPAAARRQALRADKDGDVSMGLSIKGRAGVGKSTPPTGPRKDAAGGR
PSRNGIISATAQRAILRQAGASDVSMKEVRSSGPRGGLVELKVTGWNKSKASGDEDGGVS
SLLKWLEKKASVRLGSRARSVRIKKSRVEGSDLIVKVAPEDVPPLVRMNGYGWAGTTVSI
ERLGGAVQGTPVVSSEAERIKEMLRHVLERRYDLETKFLNLSALGQDEELQQQKIFESKS
TTSKFFPAMMKVLEHSFDKKEDLFAAITSVSLANNDLEDLAAVTSLSITLPRLQNLDLSN
NKFRKLSALDNWRRRFGQLERLILTGNPIEQNDPGYAVEVVKWYPNLRQLNNVQVRTEEE
VANKAQITDMPFPIRSAIFQDEGGIAEQFVLKFFAGFDSDRAVLAAYYFDEHSEFSYAVN
SQAPRDPAATEKHEAGEWEGLLKQSRNLRKIQQLPARQARIFHGTKAVADAFIGLPQTKH
PDLAAEAKKWIVEARMVPGVPDPTGQSPNGVDGFFITVHGEVEELVASSGQIKKRSFDRT
FILGPGGVAGVRIVSDQLTLRSYGGTQAFEPENAEGWNAEPTYAAQAEIDGAPQLPEGLT
IPQAEQMVAALMSQTGMTLQYAKDCLDQSGWNAQVAVVNFEKAKAILPPTAFMSTAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcgcgttcaaagcctccacgtgcggcgccgcgtggcccagcagcggctcgacga
caagctctccgcgcggacaaagacggcgacgtcagcatggggctatcaatcaaaggcaga
gctggcgtcggcaagagcacaccacccacaggtcctcgcaaggatgctgcaggtggacga
ccatcgcggaacggaatcatcagcgcaacggcacagcgcgcgattctaagacaggcagga
gcgagcgacgtgtcgatgaaggaagtacgctccagcgggccaagaggcggtctggtcgag
cttaaggtcactggttggaacaagagtaaggcctccggcgacgaagatgggggagtcagc
tcgctgttgaagtggctagaaaaaaaggcgagcgtaagactcgggtcaagagcacgcagc
gtgaggattaagaagtcacgtgtggaaggatccgacttgatcgtcaaggttgcacctgag
gacgtgccgccgcttgtacgaatgaacggctacgggtgggctgggacgaccgtgagtatc
gagcgactcggtggcgctgttcagggcactccggtagtgtcatccgaggcggagaggatc
aaggagatgctcaggcacgtacttgagcgacgctacgacctcgaaacgaagtttctcaac
ctaagcgcgcttggccaagacgaagaacttcagcaacagaagatcttcgagtctaaatcg
actacgagcaaattcttcccggctatgatgaaagtacttgaacactcattcgacaagaag
gaagacctctttgctgcgataaccagtgtctcccttgccaacaacgaccttgaagatctg
gccgctgttacctcactatcaataacgctgccaagactgcaaaaccttgacctttcgaac
aacaagttccgaaaattatctgcccttgacaactggcgcaggcgtttcggccaacttgaa
cgcctgattctgactggcaacccaatcgagcagaacgacccaggctatgcggttgaagtc
gttaagtggtacccgaacctgcgacagctcaacaatgttcaagtgcgcactgaagaagaa
gtggcgaataaagctcagattaccgacatgccgttcccaatccggagcgctatatttcaa
gacgagggcggtatcgccgagcagttcgtactgaagttctttgcgggcttcgattctgac
cgcgcagtactcgcggcgtattattttgacgagcactccgagttctcgtacgcggtcaac
tcgcaagcaccgcgcgacccggcagcgactgagaagcacgaggcgggcgagtgggagggc
ttgctcaagcagagtcgcaaccttagaaagatccaacagcttccggcgcggcaagctagg
attttccacggcacgaaggctgttgcagatgcttttattggcctgccgcaaacgaagcat
cccgatctcgcggctgaagcgaagaaatggattgtcgaggcgaggatggtaccaggtgtg
ccagatccgacggggcagtcaccgaatggcgtagacggcttcttcattactgttcatggc
gaggttgaggagcttgtggcatcaagcggtcagatcaagaaacgcagcttcgaccgtacc
ttcatcctcggtccaggcggggtagcgggcgtccgcattgtcagcgatcaacttacattg
cgcagctacggcggcacgcaagcgtttgagcctgagaatgccgaggggtggaacgccgag
ccgacatacgccgcgcaggcagaaatcgatggcgcaccgcagctgccagaaggcctaact
ataccgcaggctgagcagatggtggcggcgctgatgtcgcagactggcatgacgctgcag
tacgctaaagactgtttggatcagagcggatggaatgcgcaggtagccgtggtgaacttc
gagaaagcgaaggccatccttccgccgacagcgttcatgtcaacggccgcttag
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integrated database retrieval system
