Baudoinia panamericana: BAUCODRAFT_354528
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Entry
BAUCODRAFT_354528 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
bcom
Baudoinia panamericana
Pathway
bcom03013
Nucleocytoplasmic transport
bcom03015
mRNA surveillance pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_354528
09122 Translation
03013 Nucleocytoplasmic transport
BAUCODRAFT_354528
03015 mRNA surveillance pathway
BAUCODRAFT_354528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_354528
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_354528
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
BAUCODRAFT_354528
Spliceosome [BR:
bcom03041
]
Complex C
Other components
EJC/TREX
BAUCODRAFT_354528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
19112705
NCBI-ProteinID:
XP_007673386
JGI:
Bauco1_354528
UniProt:
M2LYY6
LinkDB
All DBs
Position
Unknown
AA seq
191 aa
AA seq
DB search
MFVLWYTFDLTPAALPNHYNPHSYSTMADTEMELDGSPPSSPDAARKNGSSAMNNSTTAA
NAVAVRSIEGWIIIATNVHEEASEEDIQDMFGEYGEIKNLHMNLDRRTGYVKGYVLIEYP
TLTEAKAAIEGANGEKLLDQTISVDFAFVRPPPSKTPGGKGGAPRKSGGRQRSMSPDRRK
REEDDEEDEGE
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttttgtggtacactttcgacctcacgcctgctgccttacctaaccattacaat
cctcactcgtactcaaccatggcggacacagagatggaactcgacggtagcccgccttcc
tctcccgatgccgcgcggaagaatggcagcagcgccatgaacaatagcaccaccgccgcc
aatgcagttgcggtccgtagtatcgaaggctggatcatcatcgcgaccaacgtccacgag
gaagcgagcgaagaggacattcaagacatgtttggcgaatatggcgagatcaagaacttg
catatgaacctggaccgcaggacaggatacgtgaaaggctacgtgttgatagagtacccg
acgctcaccgaggcgaaagcggcgatagaaggcgcgaacggcgagaagttgctggaccag
accattagcgtggacttcgcgtttgtgcgaccgccgccgagcaaaacgcccggtgggaag
ggtggcgcgccaaggaagagtggtgggaggcaacgtagtatgagtccagataggcggaag
cgggaggaagacgatgaggaggatgagggtgaatga
DBGET
integrated database retrieval system