Baudoinia panamericana: BAUCODRAFT_35796
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Entry
BAUCODRAFT_35796 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
bcom
Baudoinia panamericana
Pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_35796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_35796
Spliceosome [BR:
bcom03041
]
Complex C
Other components
Step II factors
BAUCODRAFT_35796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD_LRWD1
WDR54
Beta-prop_Nup120_160
DUF5711
eIF2A
Motif
Other DBs
NCBI-GeneID:
19112800
NCBI-ProteinID:
XP_007678044
JGI:
Bauco1_35796
UniProt:
M2LK12
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSLVPARNGANAPPTRAADLVQGPQKTSTKGKVPTGYAQEIAISEQSFRTLHRDVQSRQS
AGRKRKREARGDSGVVYGAEAYKGPWAKYEERRIDSDSGEEVEVSADEDGVETVYEEDAI
APVPTKGSLAGTSYEQISADKETSVFEGTQQYDYQGRTYMHVPQDLDVDLTSDFDSLNLK
CYSPKKQIHTFTPPNGKNAHDRAITALKFFPHSGHLLLSSGADGKVKLWDVYHARELLRS
YSGHTKSVADVDFSPDGTRFLSASYDRQMKVWDTETGTCLGRYSTGSTPHVIRWHPSQHA
SGGEFLAGMHDNKIVQFDTRLPPNGDKKTPVQEYDHHLGPINTITFCDESRRFLTTSDDK
SLRAWEYNIPVPIKLISDPSMYPLVKSFPHPTKPSVLYQSADNTIQVYNTGDKIRANRKK
DFRGHNTAGYAVDVSVSPDGGVVASGDSGGWLCFWDWKTGRLGRRVKAGEAAVGCVGWQG
REGSRVASGDVEGVVKYWD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgtccccgcccgcaacggcgccaacgctccgcccacccgcgccgccgacctc
gtccaaggccctcagaagacatccaccaaaggcaaagtccccaccgggtatgcgcaagag
atcgccatctccgaacaatccttccgcaccctccatcgcgacgtgcaatcacggcaatcc
gcaggcaggaagcgaaaacgcgaagccaggggcgacagcggcgtcgtctacggcgcggaa
gcctacaaaggaccgtgggccaagtacgaggagcggcggatagacagcgacagcggggag
gaggtggaagtgagtgcggacgaagatggagtagagactgtgtacgaagaagacgccatc
gcccccgtccccaccaaaggatcactcgcaggcacgagctacgaacaaatcagcgcggac
aaagaaaccagcgtcttcgaaggcacgcaacaatacgactaccaaggccgcacctacatg
cacgtcccgcaagacctcgacgtggatctaacctccgacttcgacagcctcaacctgaaa
tgctactcgcccaaaaagcaaatccacaccttcacccctcccaacggcaaaaacgcacac
gaccgcgccataaccgccctcaaattcttcccccattccggtcacttattattatcttcc
ggagcagacggcaaagtgaaactctgggatgtctaccacgcccgcgaactactgcgctcc
tactccggccacaccaaatccgtcgcggacgtcgacttctcccccgacggcacccgcttc
ctctccgcctcctacgaccgccaaatgaaagtctgggacacggaaacaggaacctgcctt
ggccggtacagcaccggcagtaccccccacgtcatccgctggcacccgtcccaacacgcc
tcgggaggggagtttctggcggggatgcacgacaacaagatcgtgcaattcgacactcgc
ttgccacccaacggggacaagaaaacccccgtccaagaatacgaccaccacctcggcccc
atcaacacgataaccttctgcgacgagtcccgtcgcttcctcaccacctccgacgacaag
tccctacgggcatgggagtacaacatccccgtccccataaaactcatctccgacccgtcc
atgtaccccctcgtgaaatccttcccccaccccaccaaaccttccgtcctgtaccaatcc
gcggataacaccatccaagtctacaacaccggcgacaaaatccgcgcgaaccggaagaag
gatttccgcgggcacaatacggccgggtatgcggtggatgtgagtgtgagtcccgatggg
ggcgtggtggcgagtggggatagtggggggtggttgtgtttctgggattggaagacggga
cggttgggccggcgggtgaaggccggggaggcggcggtggggtgtgtggggtggcagggc
cgggaggggagtcgggttgcgtcgggggatgtggagggggttgttaagtattgggattga
DBGET
integrated database retrieval system