Baudoinia panamericana: BAUCODRAFT_38330
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Entry
BAUCODRAFT_38330 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K13091
RNA-binding protein 23/39
Organism
bcom
Baudoinia panamericana
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_38330
Spliceosome [BR:
bcom03041
]
Common components
Common spliceosomal components
General mRNP proteins
BAUCODRAFT_38330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_7
RRM_occluded
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
19113505
NCBI-ProteinID:
XP_007680381
JGI:
Bauco1_38330
UniProt:
M2N042
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MPTVDSQDVAELLEQEEKRALEKKRAKTHDSDPAKPTENGNRDPRRRGGDKDKYSDEREA
NDERRSRRSKELVSDEDMRKVKTEDIRDVKMEDLRDVKMEDLKDVKMEDVGRDSDKASAN
GSVRSRRRSRSPRARRSPRDRDAYRDRDYDRRDPRNSRLRDDDDRRSHRPRHSVDHDDDD
RYYRPGKDDRHDRDRREPRDRRDREIDRAYGSRRDDRRDDDRRDRQRRTTPPKRKSPEPT
DDERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEES
VQKAIQLTGQKLLGIPIIAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNIHFSITED
DLKNVFEPFGELEFVQLQKEEQGRSKGYGFVQFIDPAQAKEALEKMNGFELAGRPIRVGL
GNDKFTPESTQSLLQRFASQGQAAAFQGSSFSGMGGRGAHAGGQANFDRASGRDADKTGG
ASALDDTDVAGVNFSNYSRDALMRKLARTDDSEEKVAPKTMQKKPTGPVDQPAPSRCVLL
KNVYNQAEETEPGWQKELEEDVKVECDEKYGQVVHIGLALDNNDGEIYIKFDRKQGGENA
IRGLNGRMYGGRMITAQYVVDAVYNMNFPKAANL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtggacagccaggacgtagccgagctcctcgagcaggaggagaagagagcg
ctcgagaagaagcgtgccaagacccacgacagcgaccccgcgaagccgaccgagaatggc
aatcgcgacccacgccgcaggggcggcgacaaggacaagtattccgatgagcgtgaagcg
aatgacgagcgcaggtcccgtcgatccaaggagctcgtctcggacgaagacatgaggaag
gtgaaaacggaggatataagggatgtgaaaatggaggacctgagggatgtcaagatggaa
gacctgaaagacgtcaagatggaagatgtgggccgagactcggacaaggcttctgctaat
ggtagtgtccggagcagacgccgatcccgcagcccacgtgctaggcgctcacctcgcgac
cgtgacgcctatcgcgaccgtgactacgatcgacgtgaccctcgcaacagcaggctccgc
gatgatgatgatcggcgctctcacagacctcgtcactcagtagaccatgatgacgatgac
aggtactaccgtcccggcaaggatgacaggcatgaccgcgaccgccgtgagcctcgtgat
aggcgtgaccgcgagattgatcgagcttatggcagcaggcgcgacgataggcgcgatgac
gatcgacgcgacagacagcgtcgtaccaccccgccgaagagaaagtcaccggagccaact
gatgatgagcgtgacaggcgcaccgttttcgtgcagcagcttgcagcccgcttgcgcaca
aaggagctgcaggccttcttcgaggcagtcggaccggtggtggaagcgcaaatagtcaag
gacagggtgagcggacgctcgaagggtgtgggatatgttgaatttaaggacgaagagtca
gtacagaaagctattcaactcaccgggcagaagctacttggtatacctatcatcgcgcaa
ctcacagaagcagagaagaatcggcaggcccgccacaccgaaggcactgctacccagtcc
aatgggataccattccatcgcctttacgttggcaacatacacttctccatcaccgaagac
gacctcaagaacgttttcgagcctttcggcgagctcgaattcgtccagctccagaaggag
gagcagggtaggagcaaaggctacggcttcgtgcagttcattgaccctgcacaggcaaaa
gaagcgctcgagaaaatgaacggcttcgagctcgctggccgccccattcgcgtgggccta
ggcaatgacaagtttacgccggagagcacgcagtctttgctacagcgtttcgcctctcag
ggtcaagctgcggcattccaaggcagctcgttctcgggcatgggtggacgcggtgctcac
gctggtggtcaggcaaacttcgatcgtgctagcggcagggatgccgacaagaccggcggt
gccagtgcgctcgacgacaccgacgtcgctggcgtcaacttcagcaactattctcgcgac
gctctgatgaggaagcttgcgcgcactgatgattcggaggagaaagttgctccgaagacc
atgcagaagaagccgactggaccggtcgatcagccagcgccaagtagatgcgtgctgctg
aaaaatgtatacaaccaggccgaggagaccgagcctggctggcagaaggagcttgaggaa
gacgtcaaagtcgaatgcgatgagaagtatggccaggtcgttcacattggcctggccctc
gacaataatgacggcgagatctacatcaaatttgaccgtaagcagggcggcgagaacgcc
atccgcggcctgaacggtcgcatgtacggcgggcgcatgatcaccgcccagtacgtcgtc
gacgccgtctacaacatgaatttcccgaaagcggccaacttgtga
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