Baudoinia panamericana: BAUCODRAFT_38608
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Entry
BAUCODRAFT_38608 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_38608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_38608
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BAUCODRAFT_38608
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BAUCODRAFT_38608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF1192
WKF
CorA
Motif
Other DBs
NCBI-GeneID:
19113579
NCBI-ProteinID:
XP_007680433
JGI:
Bauco1_38608
UniProt:
M2N0W0
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAARKLQQEIDKEFKKVAEGIQAFDGIFDKLSQSSNASQREKLEDSLKKEIKKLQRSRDK
IKTWAGTNEIKDKKPLLEQRKLIESRMEQFKQVEKEMKTKAFSKEGLSAAAKLDPQERAK
MEMGAFLSDMVDELARQIEAHEAEIESLQANVKKGKKSDKADRLSELDRTVERHKWHTNK
LEILMRSLENGSVETDQVKDIEDEIKYYVETNQEVDFIENEELYDDLNLEEEEDMYGIAG
GDNDRVSSQDAQSVSEEPPDLDSSTGPIRTASVTAASKGKSASVSEAPVANGRRPSQQHV
KSPLPALTTLHQSLPSNVTGKPATTDMKPAPLPTIPTGQPLKYASAAAAAAASDKSGLGI
APLPPPPGAAAVKASEEQSSPAPVNSQPVETIQLAKAAEEVGKAPTPAPKEEQKPEEMAT
QQSSSAPSVKPSPQTTQAVPSQQLEPSAAPSAATATGTATKLPQPPSPDSGIAGLALSHG
EPAPEEEEEEEESIYHLPSSLTDLLDSFEETRQRAASSQPFADALPSLTASRLSAPQPAD
SAHPAHSHYRPPNPYPYTPPHYPQQPLPIFDDPRLYTRIDTDSLFYAFYYRQGTYQQYLA
AKALKGQSWRFHKQYQTWFQRHEEPKCITEEFEQGTYRFFDYESTWMNRRKADFKFAYKF
LEDDL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaggaagctgcaacaagagattgacaaggagttcaagaaggtggccgaaggg
atccaggcttttgatggcatcttcgacaagctcagccagagcagcaatgcctcgcagcgg
gagaagctggaggacagtctcaagaaggagatcaagaagttgcagaggtcacgcgacaag
atcaagacatgggccgggaccaatgagatcaaggataagaagcccttgctggagcagcgc
aagctgatcgagtcgcggatggagcagttcaagcaggtggagaaggaaatgaagacgaaa
gccttcagcaaagaaggcctgtctgcggccgccaagctggacccgcaagagcgcgccaag
atggagatgggtgccttcttatcggatatggtggacgagcttgcccgacaaatagaagcg
cacgaggccgagatcgagtcgctgcaagcgaatgttaaaaagggaaagaagtcggataaa
gccgaccggctctccgaactcgaccgcactgtcgaacgacataagtggcatacgaacaag
ctcgagatactcatgcgctcgctggagaacggcagtgtggagacggaccaggtgaaggac
atcgaggacgagatcaagtactacgtggaaacgaaccaggaggtagatttcatcgagaat
gaggaattgtacgatgacttgaatctcgaagaagaggaggacatgtacggcattgccggc
ggagacaacgacagagtgtcaagtcaagatgcgcaaagcgtttcagaagagccgcccgat
ttggatagctcgacgggacccatacgaacggcgagtgtgacggcagcaagcaagggcaaa
agcgcatctgtgtcagaagcaccggtggcgaatggacggaggccaagtcagcagcatgtg
aagagtcctttaccggccctgacgaccctacatcagagcttgccgagcaatgtcaccggc
aagccggcaacgacagatatgaagcctgcgcctttaccgacgataccgacgggacagccg
ttgaaatatgcctctgccgctgcggcggcggcagcgagcgacaagagcgggctaggtatc
gcaccgttacctccgccacctggcgccgcggcggtgaaggctagtgaagagcagtcttcg
ccagcaccggtcaattcacagccggtggagacgatacaattggcgaaggcggcggaggag
gttggcaaggcacctacgcctgcaccgaaggaggagcagaagccggaggagatggcaacg
cagcagtcatccagcgcgccatctgtcaagccgtcaccgcaaacgacacaagccgtgcct
tcacagcaactggaaccgtcagctgcaccttcagcagcaacagcgacagggacagcgaca
aagctaccgcagccaccttcgcccgattcaggcatagccggcctggctttgtcccacggc
gaacctgccccggaagaagaggaggaagaagaagagtcaatctatcacctcccatcttca
ctgacggacctcctggactcatttgaggagactcggcaacgtgccgcctcctctcaaccg
ttcgccgacgccctcccctcactaaccgccagccgcctttccgcgccccaacccgccgac
tccgctcatcctgcacactctcactaccgaccgccaaacccgtacccttacaccccgcct
cactacccgcaacaaccgctaccgatcttcgacgatccacggctgtatactcgaatagac
acggatagtctgttctacgccttctactatcgacaagggacttatcaacagtaccttgcc
gccaaggcgttgaaggggcagagttggaggttccataagcagtaccagacgtggttccag
cggcatgaagagcccaagtgtatcaccgaggagtttgagcaggggacttatcggttcttt
gattacgagagtacttggatgaaccgacggaaagcggacttcaagttcgcatacaagttc
ttggaggacgatctatag
DBGET
integrated database retrieval system
