Baudoinia panamericana: BAUCODRAFT_38626
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Entry
BAUCODRAFT_38626 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_38626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_38626
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BAUCODRAFT_38626
mRNA degradation factors
5'-3' decay
Decapping complex
BAUCODRAFT_38626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
19113585
NCBI-ProteinID:
XP_007680864
JGI:
Bauco1_38626
UniProt:
M2LC63
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MSFFGFDTTLPRDRQQQSSGRGMFEQHDPFAGLGQAEGGDDGEMLNFEDTYDGLGRNLDE
SGDTFNDDTFGGDEPVTRQSVGKDFDFAGQTARAMDQHGPQYGRAQAQHAPPPKPTRTGY
EAYKEPEYIPKLEADASIWGRPMGRKPTAAGGEQHGRTDSSAGKKMMSLEEVEAMLRAQA
KPIPPAMSENERQAQGLRDMLGVASPPINPQQQPPPSEQPRPVQILQRPQHTTRPEPVIQ
HPTPEHHLGASQVLQGRYSPQPPRPQSRDFHAQPPPQHVHHQQQPQMPVQPPRGPMQHLA
HQRGPSYSGPPITQAQQMMQMSAPDREAYMAEEAKRAKRNHKIFLLSKNNGLMTPQDKNF
ITRIQLQQLLTATGGVDNEPGSEEQLAEDFYYQVYAQIRGPPRSSSGNVGNGPSQFAQTY
LFQTGSRYGYGRSRHHPRGGDNHVQRMEQQVARAVEAAKARPKNKQLVVEGSLGKIAFSN
SKTPRPLLNLKRPDSEAKMRQPVKPAAVFDRKVALRDIEKMYTVLMRLEDHERKLPPPPN
EESSPEVIEGHMRWRSEMQLLNQQLWEALKVMEPIQANPTSPHPFIQILSHSKGKKAIPR
VFRHLDDQQRLTMLTLIVIHLDQLDVIRDAYPSLDNSTPLPPRVREEIEIFTQAVMPPLF
SYVNEAPLNIIIGLLGLVMDRVHVQGIVRTKVGVSVLTMLVSRAELVKQAQQPAQPSPQQ
QEDWSQWAHLYNRLFDTVEPVLPYIFPPPSASTTTSSASTLDSQASDDVHVWQFLAAMGV
GASPDQQQRLVLGVKEKVMETVGAAKALPETEAEVKDRRLGEVNLFMRAIGLDVELLG
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcttcggcttcgacaccaccctcccacgggaccgacagcagcaatcttccgga
cgaggcatgttcgagcagcatgatccctttgctggtcttggacaggccgagggtggcgat
gatggcgagatgctcaactttgaggacacctacgatgggctggggcggaacctcgacgag
tccggcgacacgttcaacgatgatacctttggcggcgatgagccggtcacacggcagagc
gtgggcaaagactttgactttgcagggcagacggcgcgggcgatggatcagcatggcccg
cagtacggccgggcacaagcacagcacgctccgccgccgaagccgacacgaacgggctac
gaggcgtacaaggagcccgagtatattcccaagctagaggctgatgcttcgatttggggt
aggccaatgggtaggaagccaacggcggcggggggtgagcagcatggccgaaccgacagc
tcggcggggaagaagatgatgagcttggaggaggtagaggcgatgctccgagcgcaagcg
aagccaataccacctgccatgtcagagaatgaaaggcaagctcaaggtctacgagacatg
ctaggcgtcgcgtctccgcccatcaatccccaacagcagccgccgccatcagagcagccg
agaccggtgcagatactgcagcgtccgcagcataccacgcggccagaaccggtcattcag
catccgactccggaacaccatctaggcgcatctcaagttctgcaaggacgatactcaccg
caaccgcctcgacctcaatcacgagactttcacgcccaacccccaccgcagcacgtgcat
caccaacaacaaccgcaaatgcctgtgcagcctccacgcggtccaatgcaacatttggca
caccaacgcggcccttcctacagcggcccgcccataacccaagcccaacaaatgatgcaa
atgtccgctcccgaccgcgaagcctacatggccgaagaagccaagcgcgccaaacgcaac
cacaagatcttcctcctcagcaagaacaacggcctcatgaccccgcaggacaagaacttc
atcacccgcatccagctgcaacaactgctcaccgccaccggcggcgtagacaacgaaccc
ggcagcgaagagcagctggcggaggacttctactaccaagtctacgcccagatccgcgga
ccgccacgcagtagttcgggtaacgtgggcaacggacccagtcagttcgcgcagacgtat
ctgttccagacgggcagtcgctacgggtacgggagaagtaggcatcacccgcgcggtggc
gacaaccacgtccagcgaatggagcagcaagtcgctcgtgcggtcgaagcggcgaaagcg
agaccgaagaataagcagcttgtcgtggaaggttcgctgggcaagatcgcgttcagcaac
tcgaagacgccgcgtccgttgcttaatctgaagcggccggattccgaggcgaagatgaga
cagccggtgaaacctgctgcggtctttgatcggaaagtggcgttgagggatattgagaag
atgtacactgtactcatgcggctggaggaccatgagcgcaagttgccgcccccgccgaat
gaggagagtagtccggaggtgattgaggggcatatgcggtggcgtagcgagatgcagctg
ctcaatcagcagttgtgggaggcactgaaggttatggagcccatacaggcgaacccaacg
tcaccccacccgttcattcagatattgtcgcacagcaaaggcaaaaaagccatcccccgc
gtcttccgccacctggacgaccaacaacgcctcaccatgctcaccctcatcgtcatccat
ctcgaccagctagacgtcatccgcgacgcttacccatcactggacaacagtactccgctc
ccgcccagagtccgagaagagatcgaaatcttcacccaagctgtcatgccaccgctcttc
agctacgttaacgaagcaccgctcaacatcatcatcggtctgctcgggctggtcatggat
cgtgtacacgtgcaagggatcgtgaggacgaaggtgggtgtgagtgtgcttacaatgttg
gtcagccgggcggagctggtgaagcaagcacaacagcctgcacagccgtccccgcaacag
caggaagattggtcgcagtgggctcacctctacaaccgtcttttcgatactgttgagccg
gtgctgccttacatcttccctccaccttccgccagtaccaccacttcgtcggctagcacg
ctggactcgcaagcatccgacgacgtacacgtctggcaattcctcgccgccatgggcgtg
ggtgcttctccagaccagcagcagaggttagtcctgggtgtcaaggaaaaggttatggag
accgtaggcgcggcaaaggctttgccggaaacagaggcggaggtcaaggatcggaggtta
ggggaggtgaatttgttcatgagggctatcgggttggatgttgagttgcttggttga
DBGET
integrated database retrieval system