Baudoinia panamericana: BAUCODRAFT_411193
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Entry
BAUCODRAFT_411193 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
bcom
Baudoinia panamericana
Pathway
bcom03022
Basal transcription factors
bcom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BAUCODRAFT_411193
09124 Replication and repair
03420 Nucleotide excision repair
BAUCODRAFT_411193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcom03021
]
BAUCODRAFT_411193
03400 DNA repair and recombination proteins [BR:
bcom03400
]
BAUCODRAFT_411193
Transcription machinery [BR:
bcom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BAUCODRAFT_411193
DNA repair and recombination proteins [BR:
bcom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BAUCODRAFT_411193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
19114072
NCBI-ProteinID:
XP_007674864
JGI:
Bauco1_411193
UniProt:
M2NGD5
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MPSTRASVSYKKKDGHLTLSDDQKYLFWTPSTPANASPAVTIPIAEITNLQQTPANSEKV
ALRVIVKDENYVFSFTSPAEARKEQEAVTEALRGVIAAGKASAAQQLKATSNGADGGESA
GQSAAMAIAKALSSRSTDEAWYDDNKLRNDFQLQRSLLQANKPLYDRFNQALKDKPESVS
VAQFTTQFWSTRLHLLRAHAIEKAQKEGEYNVLPEIKYNTVIGPDGEPIKTLNMTKEQVA
LIFKQYPVVRKAFNETVPKPFADARRFWSAFFASRLLKKLKGLRIEKNDPQDPVLDRYLE
HEEDTGPASIAGHVPHIIDLEGNEQNTHFHLEGDYEMRAAKHDRPILHILNSMSEKLLSH
VAPADGEAHAPIGMDEGTFEQLRLRDLAVQDSDNRVVLNVREQARYTGKQDEDEWSADAK
LYAQQDPEVVIEDIRAQLQPANDNGVLRLDEAIGFQSDEDDDEEEMEDGATTANGAKPAQ
VASHKSLDTASRSILSSISQRRSQTSNPTSPESLLSGLSQPLFDTLTITHNTTTEFLHYF
WTLFLSGDSSRTAELQQLVATLDRSLDRINAVAEQAEEERKARVEKMREYQKKTGKRFRF
DEAGLGGGKKVVEEMVRPTVEALKRAGAVYRTAFEEQSREAGAG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccttctacacgcgcctcggtctcgtacaagaagaaagatggccatctcactttatca
gacgaccagaagtacctcttctggactccatcaacgcccgcaaatgcttcacccgccgtg
acaatacccatagcggagatcacgaatctccaacaaacacctgctaacagcgagaaagtc
gcgcttagagtcattgttaaggacgagaactatgtcttcagcttcacgagtcctgcggag
gcgaggaaggagcaggaggcagtgaccgaagcgttgagaggggtcattgcagctggcaag
gcgagtgcggcgcagcaattgaaggccacgtcgaacggcgcagatggaggagagagtgca
gggcagagtgccgcgatggctatcgcgaaagcgttgtcatcgcgaagtacggatgaggcg
tggtacgatgacaacaagctgagaaacgacttccagctgcagaggagcttactgcaggcc
aacaaaccgctgtacgatcgcttcaaccaggccttgaaagacaagcccgagtcggtatct
gtcgcgcagtttacgacgcaattctggtctacgcgcttgcatctactgcgagcgcatgca
attgaaaaggcgcagaaggaaggagagtacaacgtcctgcccgaaatcaagtacaatact
gtcatcggtcccgacggcgagccgatcaagacactcaacatgactaaagagcaggtggcg
ttgatcttcaagcaatatcctgtcgtgaggaaagcgttcaatgagaccgtgcccaagccc
ttcgccgacgcaaggagattctggagtgccttctttgctagtcggttgctgaaaaagctg
aagggtttgaggatcgagaagaatgatccgcaagatcctgtgttggatcggtatctcgag
cacgaggaggatacgggtcccgcgagcattgctggtcacgtgcctcacattatcgacctg
gaaggcaacgagcagaacacacactttcatttggagggcgactatgagatgagggctgcc
aagcatgatcgacctatcttgcatatccttaactccatgagcgagaagttgctgagtcat
gttgcgccggcagatggggaagcgcatgcgcccattggtatggatgagggcacgttcgag
cagctgcggctgagagatctggcagtgcaggatagtgacaatcgggttgtgttgaatgtg
agggagcaggcgaggtataccggaaagcaggatgaggacgagtggagtgccgatgccaag
ctgtatgcgcagcaggatccggaggtcgtgattgaagatatccgagcacaactgcagcct
gccaacgataacggagtcctgcggcttgacgaagctatcggttttcaatccgacgaagat
gacgacgaagaagaaatggaagacggcgcgactaccgccaacggcgctaagccagcccaa
gtcgcctcccacaagtccctcgacaccgcctcccgctccatattatcatcaatctcgcaa
aggcgctcgcagacctccaaccccacttcgcccgagtctctcctttccggcttatcgcag
cccctattcgacaccctcaccataacccacaacaccaccaccgagttcctgcactacttc
tggaccctcttcctttccggcgacagcagccggacggccgaactacagcaactcgtcgcc
acgctggatcgaagtctcgatcgcattaatgcggtcgcggagcaggcggaggaggagcgg
aaggcgagggtggagaaaatgagggagtatcagaagaaaacgggaaagaggttcaggttt
gatgaggcgggtttgggtggcgggaagaaggtggtggaggagatggtgcggccaactgta
gaggctttgaagcgggcgggggcggtgtataggacggcgtttgaggaacagagtagggag
gctggagccgggtaa
DBGET
integrated database retrieval system
