Baudoinia panamericana: BAUCODRAFT_426426
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Entry
BAUCODRAFT_426426 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
bcom
Baudoinia panamericana
Pathway
bcom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAUCODRAFT_426426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_426426
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BAUCODRAFT_426426
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
BAUCODRAFT_426426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
PixA
Motif
Other DBs
NCBI-GeneID:
19114217
NCBI-ProteinID:
XP_007675063
JGI:
Bauco1_426426
UniProt:
M2NGL9
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MSSSSIALPGHNLGPIASNNVGPGTHIHCSHLFASIAGSVITTPPPPKSKAAPTVSIAQP
PLLPEVGTLVLGRITRTNPRQANLSILALYPSASAATTDPVPLAEPFSAIIRQQDIRLTE
IDKVKVAESFRVGDIVRAVVISLGDERSYYASTAKNELGVVMAWSEASGEAMWPVSWREF
EDPSTGVREARKVAKPV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcatcatctatagccctccccggccacaacctcggaccaatagcctccaacaac
gtcggtcctggcacgcacatccactgctcccatctcttcgccagcatcgccggcagcgtc
atcaccactccgcccccgccgaaatcaaaagcagcccctaccgtctcgattgctcagcct
cctctgctgccagaagtaggaacactagtgctaggccgcatcacgcgcaccaacccgcga
caagcgaacctttcaattttagcgctttacccttccgcctccgccgccactactgacccg
gttcccctggcggagcctttctcagccatcattcgccaacaggacatccgccttaccgag
atcgacaaagtcaaagtcgccgaaagtttcagagtgggagacattgtccgcgcggtggtg
attagtttgggagacgagaggagttactacgccagtacggcgaagaacgagttgggtgtg
gtgatggcgtggagtgaggcgagtggggaggcgatgtggcccgttagttggagggagttt
gaggatccgtctacgggagtgagagaggcgaggaaagtcgctaagccggtttga
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integrated database retrieval system