Baudoinia panamericana: BAUCODRAFT_47071
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Entry
BAUCODRAFT_47071 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bcom
Baudoinia panamericana
Pathway
bcom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
BAUCODRAFT_47071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcom03400
]
BAUCODRAFT_47071
DNA repair and recombination proteins [BR:
bcom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
BAUCODRAFT_47071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-HC5HC2H
zf-HC5HC2H_2
PHD
GREB1_N
Prok-RING_1
C1_2
PHD_NSD
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
19114664
NCBI-ProteinID:
XP_007678720
JGI:
Bauco1_47071
UniProt:
M2N427
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
IPAYYACYLLRSTVRHQSLYVGSTPNPVRRLKQHNGIAPGGAVRTSRDTLRPWEMTCLVS
GFPSKIAALQFEWAWQNPQLTRHITADTRLAQARTNTRISPKTGKVRKRPGRPRLSLTDR
LANLHLLLRAPSFERWPLKVTFYAEDVFRVWSKWTSQHLERLRPGISVALDDCARSHSDN
HILNPDRPTGISAIDVTYRTLKPHVDKSRRLFDNAEWVNCAVCAEGLPASGASTLICPTE
GCNAMSHVECLSARFLAVEHDQDAIVPISGSCPGCGSQLQWVDLVKELSLRMRGPKQLEA
LFKARRKAK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atcccagcatactacgcgtgctaccttctccgctcaacagtacgccaccagagtctgtac
gtcgggagcacgccgaatcctgtcaggcgactgaaacaacataatggcattgctcctggc
ggtgcagttcgaacgtcacgcgacacattgagaccatgggagatgacatgcctagtctcc
ggctttccgagcaagattgctgcgctccaatttgaatgggcctggcagaacccccaactt
actcgccacatcactgccgatactcgattggcccaagccaggactaacacacggatctct
cctaagaccggaaaggtgcgaaagcgtccaggtaggccacggctttcgcttacggaccgc
ctagcgaacctgcacttgttgcttcgagctcctagcttcgagcgatggccgctcaaagtg
accttctacgccgaggatgtctttcgcgtgtggtccaagtggacgagccaacatctggaa
agattgaggcctggcatctcagttgcactagacgactgtgcccggtctcattcagataac
catatcctcaaccctgaccggccaaccggaatatctgccattgacgtgacgtaccgaact
ctcaagcctcacgtcgacaagtcaaggcgactcttcgataatgccgaatgggtcaattgt
gctgtatgcgctgaaggtctgccagcgagcggagcctcgacgctgatctgtccaaccgaa
ggatgcaacgccatgtcgcatgtagaatgcctctcagctagattcctggctgtcgaacat
gatcaagatgccatcgtcccaattagtgggagctgcccaggatgcggaagccagcttcag
tgggtagacctagtcaaggagttgagtctgcggatgcgaggtccaaaacagctagaggcc
ttgttcaaggcccgtcgcaaggccaag
DBGET
integrated database retrieval system
