KEGG   Baudoinia panamericana: BAUCODRAFT_52771
Entry
BAUCODRAFT_52771  CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K12879  THO complex subunit 2
Organism
bcom  Baudoinia panamericana
Pathway
bcom03013  Nucleocytoplasmic transport
bcom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BAUCODRAFT_52771
  09122 Translation
   03013 Nucleocytoplasmic transport
    BAUCODRAFT_52771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_52771
   03041 Spliceosome [BR:bcom03041]
    BAUCODRAFT_52771
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     BAUCODRAFT_52771
Spliceosome [BR:bcom03041]
 Complex C
  Other components
   EJC/TREX
    BAUCODRAFT_52771
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    BAUCODRAFT_52771
SSDB
Motif
Pfam: THOC2_N Tho2 Thoc2
Other DBs
NCBI-GeneID: 19115192
NCBI-ProteinID: XP_007675367
JGI: Bauco1_52771
UniProt: M2LRL8
LinkDB
Position
Unknown
AA seq 1619 aa
MAPGSANKRKRLDRQFTHEDGGRPSPHRPENLSMAQRMEHGGGPRRGGGGGRRQSRQSNP
ADGVNAVPVVPRNALSPPAPSRTPLQVATPSAEISRNSTPLPPTAVSALPPAEEMPMEPP
APYAYDVITDAMIPVWQENGKQSVLDTLKDADELGLNTVLQELVRSGLDGRLEAVEVGRE
IQQVISELQSDDLDAQTSFLNTISLLDEADTQNPALLAMLVTTEIDAELVRQNLDVPLLT
TLSLVRQSFNQIRARKTTNLLYRQANFNLLREETEGYAKLLTEYFNVAEESNKTTNPAIA
EDAFQRIMALVGAFDLDVGRVLDITLDISANLLVKAYPFFIKFYRCSSWWPDGGNLDSVR
WEDDGFNTFPAWALPGSGRVGPSDNEKSELVSSIQSRDKRFWEQVREKGIQAFYELGARR
IVDFDSVVEQLSIDAQPELDSRGKEITEDRRKRANENRKYMRETGVLPAPGNSDAAQLLG
FKLRFYASPARDPDDVMPDNLIHFAALLIKTGFVSLRDLYPHLHPPDEKMEDERARLEEE
KTEKEARAKPGGGPNALAMASALTDDTLPVARGLRSEKDRSGGATPKPAQKEDATADPLQ
SPPNQKIGLLKALLALGAIPEALYILGRFPWLLDVDTTLPPYLHRIVRHMLLKVSDTVRP
LATRPGVGEGRQQLNDTAAKSDGPQTFVPRAPKLPTKWLGLEEVSERDGSRYRYYYTQWA
DNLPLCQTLDDVFLLCDSLVAFLGVKIGQDTAILGTLVRLARNDLAEDGSESNRARWLEL
MKRLLVPALSLSKHNQSLSDEIYQLLMLYPITARYEIYAEWFTGKTSRLADIKVAFDHNK
AEVKDVLRRVSNENVKSQSRALGKVSYSSPGVLIMFMINQLETYSNMIPAMVECTKYFSK
LAFDVLIWCLINSLSGQGRDRMQADGMLTSPWLQALSQFVASLFHRYSNINPSPVLQYLA
SELRAGNSTDLEMFEQVLGEMAGIRADVEFNDNQVYNMAGGENLRAYVMQQLGDTRHARK
AQARRLIKALAEPGLIGQTLIAIAQEKQMYPHHEASKFMPLKVLGNNLDKIQQVFTQYLE
VLRTNLKPEEFETAVPDVVSLVGDFKLAPGIAFTICRSVIAHRMAAEDSRKLEASRKNRA
SHGKAQVNGEVEMQDADAQPASGAEQAAEEKPAINGEFHEHAVTEAEAQIAAKPMPNGVH
DQQSSPWHPVLQPLIDRLPTVTGNLADRVSIPFFVTFWTLSQSDIFTNFTDVYKFEIKRL
DDEIKVISRDRGDRSTAATSERSRKVKALTEVHSHLNAEVKNQLSDYMKLSGRLSRQEKA
HWFARSRNRPELEQRHTALLQECFIPRALMSSLDAHYSYMMLRMLHDKSAPGFSTLILID
RLMQKQELAAIISQCTGQEAQHFGRFLNEMLKMLAEWHASRSAYEQHALGNRKVAGFVTG
PMDYGASPDTWTFMDYELYRRQLTNWHTALCNALQLCFESREYMHIRNGIHVLKAVVGVF
PALTFQGKALIAAAEKISKEDSRQDLKLMALSLLGPLKTREKAWVMPQAFRLAVASKEGE
SASRAASVKPETPMPEDATPKLNAAAPEFKPSAQALTTNGVVKKESLAGVEDGEVEEEK
NT seq 4857 nt   +upstreamnt  +downstreamnt
atggctccagggagtgcgaacaagcgtaagcggctggaccgtcaattcactcacgaagat
ggaggtcgaccgtcccctcatcgcccagaaaacttgagcatggctcagcggatggagcat
ggtggaggtcccaggaggggcggaggcggtggcaggaggcagagtaggcagtcaaatcct
gcggatggcgtgaatgcggtaccggttgttccacgcaacgcgctatcaccaccggcgcca
tcacggacaccactccaggttgccacaccaagcgcagaaatatcaagaaacagtacgccg
cttccaccaacagccgtgtccgcactgccgcccgcggaagagatgccaatggagccaccc
gcgccatatgcctacgacgtgattacagacgcgatgattcctgtttggcaggagaatggg
aagcagtccgtgctcgatacgttgaaagatgccgatgagcttggattgaacacagtactg
caggagctggtgcggtctggcctagacggccggctagaggctgtagaggtcggacgggag
atacagcaagtcatatcagagttacagagcgacgatttggatgcacagacttctttcctt
aacacgatatcactgctcgatgaagctgacacgcaaaaccctgcgcttcttgctatgctg
gtcacgaccgagattgacgcggaactcgtaaggcagaacctggacgtcccactccttacg
acgctttcgctggtccgtcagtcattcaatcagatacgggcgcgaaagacaacgaaccta
ctgtaccgtcaagcgaactttaacttgctgcgagaggaaaccgaagggtacgccaagctt
ctcacggagtatttcaacgttgccgaggagtcgaacaagaccacgaatccggccatcgct
gaagatgcgttccaacgcatcatggcacttgtcggcgcattcgatttggacgtgggaaga
gtcttggacatcaccttggacattagtgccaacctgctggttaaggcgtacccgtttttc
atcaagttctatcgttgcagctcctggtggccggatggcggcaatttggacagtgttcga
tgggaagacgacggcttcaacaccttccccgcctgggcattaccgggatcgggacgagtg
gggccctccgacaacgagaagagcgagcttgttagctcgatccaatcgcgagacaagcgg
ttttgggagcaagttcgcgaaaagggcattcaagctttctacgagctaggcgctcgaagg
attgtcgacttcgactccgtcgtcgagcagttgtctattgatgcacagccggagctcgat
tcgcgtggcaaagagatcactgaagatcggagaaagcgtgccaacgagaatcgcaaatac
atgcgcgaaaccggggtactaccggcaccaggcaattcggacgccgcgcaactgcttggc
ttcaagctgcgcttctacgcttcgccagcccgtgatcctgacgatgtcatgcccgataac
ttaatacactttgctgcattgctcatcaagaccggctttgtctccctacgcgacctgtac
ccgcatttacacccgccagacgagaaaatggaggatgagcgtgcgaggcttgaagaggaa
aagacagagaaggaagcgagagctaagccaggcggaggcccaaacgcacttgcaatggcc
tctgccttgactgacgacactctgcccgtcgcgcgtgggctgcggagcgagaaagatcgt
agcggaggagcaacgccgaagcctgcgcagaaggaagatgcgacagcagacccattacag
tctccgccaaaccaaaagatcggtttactgaaggcgctcttggccttaggagcgataccc
gaggcgctctacatccttggccgcttcccttggcttttggatgtggacactacgcttccg
ccgtatctgcaccgtatcgtcaggcatatgctgcttaaagtttccgacaccgtccgaccg
cttgccactcgtccaggcgtcggtgaaggccgccagcagctcaacgataccgctgcgaag
tctgatggaccgcagacattcgttccgagagcacctaagctacctacgaaatggctaggt
cttgaagaagtgtcagagagagacggctcaagataccggtactactatactcaatgggct
gataacctgccgctctgccagactttggacgatgtcttcctcctgtgcgactctcttgtc
gccttccttggagtcaagataggccaggacaccgccatattgggcacactcgtcaggctg
gctaggaacgatctggcagaagacggttcggagagcaatcgcgcccgttggctcgagctc
atgaagcgtctccttgtaccggcgctcagcttgagcaagcacaatcaaagtctcagtgac
gagatttaccagctgcttatgctctaccccatcactgctcgatacgagatctacgcagag
tggttcactggcaaaacatctcgcctagctgatattaaggttgcatttgatcacaacaaa
gccgaagtcaaagacgtacttcgccgcgtctcaaacgagaacgttaagagccagtctcgt
gcacttggcaaggtgtcgtactcttcgcctggagttctgataatgttcatgatcaaccag
ctggaaacgtacagcaacatgattccggctatggtggagtgcacaaagtatttctccaaa
ctggcatttgacgtgctgatctggtgcttgatcaattcgctcagtggacagggtagggat
cggatgcaggcggacggcatgcttaccagtccatggctacaagcgttgtcgcagtttgtc
gcatcgctgttccatcgctactccaacataaacccctcgcccgttctccaataccttgca
tcagagctgcgcgccggcaactccaccgaccttgaaatgttcgagcaagtgctgggagag
atggccggcattcgagcggatgtggagttcaacgacaaccaggtgtataacatggctggc
ggcgagaacctgcgcgcctatgtcatgcaacaacttggcgatactcgacatgcaagaaaa
gctcaagctaggcgtctgatcaaggctcttgctgaacctggcctaattggccaaaccctc
attgctattgcgcaggagaagcagatgtacccgcatcatgaagcatcaaagttcatgcct
ctcaaggtactgggcaacaatcttgacaagatacagcaagtcttcacgcagtatctcgag
gtgctccgaacgaacctcaagccggaagagttcgaaactgctgtgcccgatgtagtgagt
cttgttggagacttcaagctggccccaggtattgcattcactatctgccgttcagtgatt
gcgcacaggatggcagcagaggactcgcggaaactagaggcgtcaaggaagaatagagcg
agtcatggaaaagcgcaggtcaacggtgaagtggaaatgcaagacgcggacgctcagccg
gctagcggggctgagcaggcagctgaggagaagcctgccatcaatggcgaattccatgag
catgccgttacggaggcggaagcacagatcgcggcaaagccgatgccaaatggcgttcac
gatcagcagtcatcaccatggcacccagtcctgcagcccctcattgatcgtttacctact
gtcactggcaatctcgctgatcgcgtcagcataccattcttcgttactttctggactctg
tcgcagtctgacatcttcacaaacttcaccgatgtctacaagttcgagataaagcgtttg
gacgatgagattaaggtcatcagccgtgatcgcggagacagatcgactgcagccacgagc
gagcgcagccgcaaggtgaaggcgctcacggaggtgcacagtcacttgaatgccgaagtc
aagaatcagctgagcgactatatgaagcttagcggccggctcagtcgtcaagaaaaggcg
cactggtttgcgcgctcaagaaaccggccggaattggagcagaggcatacagcactgctt
caggagtgcttcattccccgtgcgctgatgtcgtcgctggacgctcattatagttacatg
atgctgcgaatgctgcacgacaagagcgcgccgggtttcagcacgcttatcttgattgac
cggcttatgcagaagcaggagctagcggccattatctctcagtgcaccggacaagaagcg
caacactttggtcgcttcttgaacgagatgcttaagatgctcgctgaatggcatgcaagt
aggtctgcctacgagcagcatgcactgggcaaccgtaaggtcgccggcttcgtcactggc
cctatggattacggcgcgagccctgacacgtggaccttcatggattacgagctttaccgg
cgtcaactcacgaattggcacactgccttgtgtaatgcgctacagctctgcttcgagtcc
cgggagtatatgcacatacgtaatggcattcatgttctcaaagcagtcgtaggcgtcttc
ccggcgctgacgttccaaggcaaggcactgattgccgcggcggagaagatctcgaaggaa
gactcgaggcaggatctcaagctgatggctttgagcttactaggtccgctcaagacacgt
gagaaagcttgggttatgcctcaagcgttccgcctcgccgttgcgtccaaggagggtgaa
tctgcaagtcgagcagcaagcgtgaagccagagacgcccatgcctgaagatgccacgccg
aagctaaatgctgctgctcctgagttcaagcccagcgctcaagcactgacgaccaacggt
gtggtcaaaaaggagtccctcgctggtgtagaagatggagaagtggaggaagagaag

DBGET integrated database retrieval system