Baudoinia panamericana: BAUCODRAFT_52771
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Entry
BAUCODRAFT_52771 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
bcom
Baudoinia panamericana
Pathway
bcom03013
Nucleocytoplasmic transport
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_52771
09122 Translation
03013 Nucleocytoplasmic transport
BAUCODRAFT_52771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_52771
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_52771
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
BAUCODRAFT_52771
Spliceosome [BR:
bcom03041
]
Complex C
Other components
EJC/TREX
BAUCODRAFT_52771
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
BAUCODRAFT_52771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
19115192
NCBI-ProteinID:
XP_007675367
JGI:
Bauco1_52771
UniProt:
M2LRL8
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MAPGSANKRKRLDRQFTHEDGGRPSPHRPENLSMAQRMEHGGGPRRGGGGGRRQSRQSNP
ADGVNAVPVVPRNALSPPAPSRTPLQVATPSAEISRNSTPLPPTAVSALPPAEEMPMEPP
APYAYDVITDAMIPVWQENGKQSVLDTLKDADELGLNTVLQELVRSGLDGRLEAVEVGRE
IQQVISELQSDDLDAQTSFLNTISLLDEADTQNPALLAMLVTTEIDAELVRQNLDVPLLT
TLSLVRQSFNQIRARKTTNLLYRQANFNLLREETEGYAKLLTEYFNVAEESNKTTNPAIA
EDAFQRIMALVGAFDLDVGRVLDITLDISANLLVKAYPFFIKFYRCSSWWPDGGNLDSVR
WEDDGFNTFPAWALPGSGRVGPSDNEKSELVSSIQSRDKRFWEQVREKGIQAFYELGARR
IVDFDSVVEQLSIDAQPELDSRGKEITEDRRKRANENRKYMRETGVLPAPGNSDAAQLLG
FKLRFYASPARDPDDVMPDNLIHFAALLIKTGFVSLRDLYPHLHPPDEKMEDERARLEEE
KTEKEARAKPGGGPNALAMASALTDDTLPVARGLRSEKDRSGGATPKPAQKEDATADPLQ
SPPNQKIGLLKALLALGAIPEALYILGRFPWLLDVDTTLPPYLHRIVRHMLLKVSDTVRP
LATRPGVGEGRQQLNDTAAKSDGPQTFVPRAPKLPTKWLGLEEVSERDGSRYRYYYTQWA
DNLPLCQTLDDVFLLCDSLVAFLGVKIGQDTAILGTLVRLARNDLAEDGSESNRARWLEL
MKRLLVPALSLSKHNQSLSDEIYQLLMLYPITARYEIYAEWFTGKTSRLADIKVAFDHNK
AEVKDVLRRVSNENVKSQSRALGKVSYSSPGVLIMFMINQLETYSNMIPAMVECTKYFSK
LAFDVLIWCLINSLSGQGRDRMQADGMLTSPWLQALSQFVASLFHRYSNINPSPVLQYLA
SELRAGNSTDLEMFEQVLGEMAGIRADVEFNDNQVYNMAGGENLRAYVMQQLGDTRHARK
AQARRLIKALAEPGLIGQTLIAIAQEKQMYPHHEASKFMPLKVLGNNLDKIQQVFTQYLE
VLRTNLKPEEFETAVPDVVSLVGDFKLAPGIAFTICRSVIAHRMAAEDSRKLEASRKNRA
SHGKAQVNGEVEMQDADAQPASGAEQAAEEKPAINGEFHEHAVTEAEAQIAAKPMPNGVH
DQQSSPWHPVLQPLIDRLPTVTGNLADRVSIPFFVTFWTLSQSDIFTNFTDVYKFEIKRL
DDEIKVISRDRGDRSTAATSERSRKVKALTEVHSHLNAEVKNQLSDYMKLSGRLSRQEKA
HWFARSRNRPELEQRHTALLQECFIPRALMSSLDAHYSYMMLRMLHDKSAPGFSTLILID
RLMQKQELAAIISQCTGQEAQHFGRFLNEMLKMLAEWHASRSAYEQHALGNRKVAGFVTG
PMDYGASPDTWTFMDYELYRRQLTNWHTALCNALQLCFESREYMHIRNGIHVLKAVVGVF
PALTFQGKALIAAAEKISKEDSRQDLKLMALSLLGPLKTREKAWVMPQAFRLAVASKEGE
SASRAASVKPETPMPEDATPKLNAAAPEFKPSAQALTTNGVVKKESLAGVEDGEVEEEK
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggctccagggagtgcgaacaagcgtaagcggctggaccgtcaattcactcacgaagat
ggaggtcgaccgtcccctcatcgcccagaaaacttgagcatggctcagcggatggagcat
ggtggaggtcccaggaggggcggaggcggtggcaggaggcagagtaggcagtcaaatcct
gcggatggcgtgaatgcggtaccggttgttccacgcaacgcgctatcaccaccggcgcca
tcacggacaccactccaggttgccacaccaagcgcagaaatatcaagaaacagtacgccg
cttccaccaacagccgtgtccgcactgccgcccgcggaagagatgccaatggagccaccc
gcgccatatgcctacgacgtgattacagacgcgatgattcctgtttggcaggagaatggg
aagcagtccgtgctcgatacgttgaaagatgccgatgagcttggattgaacacagtactg
caggagctggtgcggtctggcctagacggccggctagaggctgtagaggtcggacgggag
atacagcaagtcatatcagagttacagagcgacgatttggatgcacagacttctttcctt
aacacgatatcactgctcgatgaagctgacacgcaaaaccctgcgcttcttgctatgctg
gtcacgaccgagattgacgcggaactcgtaaggcagaacctggacgtcccactccttacg
acgctttcgctggtccgtcagtcattcaatcagatacgggcgcgaaagacaacgaaccta
ctgtaccgtcaagcgaactttaacttgctgcgagaggaaaccgaagggtacgccaagctt
ctcacggagtatttcaacgttgccgaggagtcgaacaagaccacgaatccggccatcgct
gaagatgcgttccaacgcatcatggcacttgtcggcgcattcgatttggacgtgggaaga
gtcttggacatcaccttggacattagtgccaacctgctggttaaggcgtacccgtttttc
atcaagttctatcgttgcagctcctggtggccggatggcggcaatttggacagtgttcga
tgggaagacgacggcttcaacaccttccccgcctgggcattaccgggatcgggacgagtg
gggccctccgacaacgagaagagcgagcttgttagctcgatccaatcgcgagacaagcgg
ttttgggagcaagttcgcgaaaagggcattcaagctttctacgagctaggcgctcgaagg
attgtcgacttcgactccgtcgtcgagcagttgtctattgatgcacagccggagctcgat
tcgcgtggcaaagagatcactgaagatcggagaaagcgtgccaacgagaatcgcaaatac
atgcgcgaaaccggggtactaccggcaccaggcaattcggacgccgcgcaactgcttggc
ttcaagctgcgcttctacgcttcgccagcccgtgatcctgacgatgtcatgcccgataac
ttaatacactttgctgcattgctcatcaagaccggctttgtctccctacgcgacctgtac
ccgcatttacacccgccagacgagaaaatggaggatgagcgtgcgaggcttgaagaggaa
aagacagagaaggaagcgagagctaagccaggcggaggcccaaacgcacttgcaatggcc
tctgccttgactgacgacactctgcccgtcgcgcgtgggctgcggagcgagaaagatcgt
agcggaggagcaacgccgaagcctgcgcagaaggaagatgcgacagcagacccattacag
tctccgccaaaccaaaagatcggtttactgaaggcgctcttggccttaggagcgataccc
gaggcgctctacatccttggccgcttcccttggcttttggatgtggacactacgcttccg
ccgtatctgcaccgtatcgtcaggcatatgctgcttaaagtttccgacaccgtccgaccg
cttgccactcgtccaggcgtcggtgaaggccgccagcagctcaacgataccgctgcgaag
tctgatggaccgcagacattcgttccgagagcacctaagctacctacgaaatggctaggt
cttgaagaagtgtcagagagagacggctcaagataccggtactactatactcaatgggct
gataacctgccgctctgccagactttggacgatgtcttcctcctgtgcgactctcttgtc
gccttccttggagtcaagataggccaggacaccgccatattgggcacactcgtcaggctg
gctaggaacgatctggcagaagacggttcggagagcaatcgcgcccgttggctcgagctc
atgaagcgtctccttgtaccggcgctcagcttgagcaagcacaatcaaagtctcagtgac
gagatttaccagctgcttatgctctaccccatcactgctcgatacgagatctacgcagag
tggttcactggcaaaacatctcgcctagctgatattaaggttgcatttgatcacaacaaa
gccgaagtcaaagacgtacttcgccgcgtctcaaacgagaacgttaagagccagtctcgt
gcacttggcaaggtgtcgtactcttcgcctggagttctgataatgttcatgatcaaccag
ctggaaacgtacagcaacatgattccggctatggtggagtgcacaaagtatttctccaaa
ctggcatttgacgtgctgatctggtgcttgatcaattcgctcagtggacagggtagggat
cggatgcaggcggacggcatgcttaccagtccatggctacaagcgttgtcgcagtttgtc
gcatcgctgttccatcgctactccaacataaacccctcgcccgttctccaataccttgca
tcagagctgcgcgccggcaactccaccgaccttgaaatgttcgagcaagtgctgggagag
atggccggcattcgagcggatgtggagttcaacgacaaccaggtgtataacatggctggc
ggcgagaacctgcgcgcctatgtcatgcaacaacttggcgatactcgacatgcaagaaaa
gctcaagctaggcgtctgatcaaggctcttgctgaacctggcctaattggccaaaccctc
attgctattgcgcaggagaagcagatgtacccgcatcatgaagcatcaaagttcatgcct
ctcaaggtactgggcaacaatcttgacaagatacagcaagtcttcacgcagtatctcgag
gtgctccgaacgaacctcaagccggaagagttcgaaactgctgtgcccgatgtagtgagt
cttgttggagacttcaagctggccccaggtattgcattcactatctgccgttcagtgatt
gcgcacaggatggcagcagaggactcgcggaaactagaggcgtcaaggaagaatagagcg
agtcatggaaaagcgcaggtcaacggtgaagtggaaatgcaagacgcggacgctcagccg
gctagcggggctgagcaggcagctgaggagaagcctgccatcaatggcgaattccatgag
catgccgttacggaggcggaagcacagatcgcggcaaagccgatgccaaatggcgttcac
gatcagcagtcatcaccatggcacccagtcctgcagcccctcattgatcgtttacctact
gtcactggcaatctcgctgatcgcgtcagcataccattcttcgttactttctggactctg
tcgcagtctgacatcttcacaaacttcaccgatgtctacaagttcgagataaagcgtttg
gacgatgagattaaggtcatcagccgtgatcgcggagacagatcgactgcagccacgagc
gagcgcagccgcaaggtgaaggcgctcacggaggtgcacagtcacttgaatgccgaagtc
aagaatcagctgagcgactatatgaagcttagcggccggctcagtcgtcaagaaaaggcg
cactggtttgcgcgctcaagaaaccggccggaattggagcagaggcatacagcactgctt
caggagtgcttcattccccgtgcgctgatgtcgtcgctggacgctcattatagttacatg
atgctgcgaatgctgcacgacaagagcgcgccgggtttcagcacgcttatcttgattgac
cggcttatgcagaagcaggagctagcggccattatctctcagtgcaccggacaagaagcg
caacactttggtcgcttcttgaacgagatgcttaagatgctcgctgaatggcatgcaagt
aggtctgcctacgagcagcatgcactgggcaaccgtaaggtcgccggcttcgtcactggc
cctatggattacggcgcgagccctgacacgtggaccttcatggattacgagctttaccgg
cgtcaactcacgaattggcacactgccttgtgtaatgcgctacagctctgcttcgagtcc
cgggagtatatgcacatacgtaatggcattcatgttctcaaagcagtcgtaggcgtcttc
ccggcgctgacgttccaaggcaaggcactgattgccgcggcggagaagatctcgaaggaa
gactcgaggcaggatctcaagctgatggctttgagcttactaggtccgctcaagacacgt
gagaaagcttgggttatgcctcaagcgttccgcctcgccgttgcgtccaaggagggtgaa
tctgcaagtcgagcagcaagcgtgaagccagagacgcccatgcctgaagatgccacgccg
aagctaaatgctgctgctcctgagttcaagcccagcgctcaagcactgacgaccaacggt
gtggtcaaaaaggagtccctcgctggtgtagaagatggagaagtggaggaagagaag
DBGET
integrated database retrieval system