Baudoinia panamericana: BAUCODRAFT_536540
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Entry
BAUCODRAFT_536540 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
bcom
Baudoinia panamericana
Pathway
bcom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BAUCODRAFT_536540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcom03009
]
BAUCODRAFT_536540
Ribosome biogenesis [BR:
bcom03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
BAUCODRAFT_536540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
EIF3I
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
DSE1_N
Utp12
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_Vps41
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_VPS8
WDR54
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
WD40_RFWD3
SHKBP1_KCTD3_C
Beta-prop_pof12
PROPPIN
DIKK1-2-4_C-subdom1
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
19115268
NCBI-ProteinID:
XP_007677844
JGI:
Bauco1_536540
UniProt:
M2LLY2
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MVRSYRRYEAGASFGTVCTASSNTVWTADASSRSTGAGRAYVGANEDVLCWDVKKSELLS
RWSDKDNKAEVTALAPCAAQPDLFAAGYADGSIRIWDALSAQIVVSFNGHRSAVTHLQFD
REGARLASGSRDTDVIVWNLLSETAEFRLRGHKDQITGLAFLQTRVSGRQSPHTDEAVDV
ADEDGEVEEKYLISTSKDALIKLWDLTSPHCVETHVAQTNGECWALGISPDGQGCITAGN
DGELKVWRIDVDALSELDSRLGESKKQDILISQGIIRRQGKDRTIGVSFHPRQDYIAVHG
SEKAVEIWRIRPADEVHRHMLRKRRRRREKAAAAGETLPAENEDKIGTPTVDDIFTPYVI
IRTTGKVRSTFWAQPARSTKSLQLLVATTNNQLELYTITHHRAQQQQPPTNKDSPEYTRA
LAVDLPGHRTDIRTLALSSDDRMLASASNGQLKLWNLKTQSCLRTLDCGQALCSAFLPGD
RIVLLGTKSGDLEMYDIATATLIQSLPAHEGHAIWTLAVAPDGRSVVTGSADKTAKFWRF
DVVDEEIPGTRRTTQRLTLTQTRELKLSDDILALTFSPDHRLLAVATLDLTVKIFFVDSL
KLFLTLYGHKLPVLDLTISSDSKVIATCSADKHVRLWGLEFGDCHKSFYAHEDSVMAVRF
VPHPIEREEGRLLFSAGKDGVIRSWDGEKFVPIQRLLGHKGEVWAMAVSRTGETVVTAGH
DKSLRVWGVGDDLIFLEEEREREVEELHERSLAENLDRDFRDEDGDGNEEVAAAGKQTIG
TLTHGEKVLEALELCVADLEAMNNHEREKQRNPNAAPPQRNPVFLARGNVTASQYMLQTL
SAIPTPALNDALLVIPFSSLPNLFTFLSIFLRERMRPELAWRVVYFLLQVHMQQIVASGH
LKGVLEEVLEACERWQEGERRVVGCNLAGLGVLGREVREVEVGGGGWLGDVEVEEEAVEK
GARGRKRGFVGVG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgctcctaccgccgctacgaggccggtgcttctttcgggaccgtgtgcaccgcc
tcgtccaacaccgtttggactgcggatgcatcttcacgctccacaggtgccgggcgggca
tacgttggcgcaaacgaagatgtgctatgctgggacgtgaagaagagcgaacttctctca
cgctggtcggacaaggacaataaggccgaagtcactgctcttgcgccatgtgctgcgcag
cctgacctgttcgctgccggctacgcggatggctcgatacggatatgggacgctctttcg
gcgcagattgtggtgagctttaacggccaccgcagtgccgtcacgcatttacagttcgat
cgcgagggtgcgaggctggcgagtgggagtagggatacggatgtgattgtgtggaatctg
ctgagtgagacggccgagttcaggttgaggggccataaggaccagattactggtttggca
tttttgcagacgagagtaagtggcaggcagagtccgcataccgatgaggcggtcgatgtt
gcggacgaggatggagaggtggaagagaagtatctcatatcgacctctaaagacgcgctc
atcaagctgtgggacttgaccagtccgcactgcgtggagacgcacgttgcgcaaaccaat
ggcgagtgctgggctttgggcattagtcccgacggtcaaggctgcatcactgctggcaat
gatggagagttgaaagtctggcgcatcgatgtggatgcgctgtccgagttggactctcgg
ctgggcgagagcaagaagcaggacatcctaatcagccaagggatcattcggcgtcagggc
aaagacagaaccattggcgtctcatttcaccccagacaagattacatcgccgtgcatggc
tcggagaaggctgtcgagatctggcgcatacgcccggcagacgaagtacatcgacacatg
ctccgcaagcggagacgaaggagggaaaaggcggctgcagcaggagagacgttacctgca
gaaaacgaagacaaaatcggcacacccaccgtcgacgacatcttcactccctacgtgatc
atccgtacaaccggcaaagtccgctccaccttctgggcccaacccgcccggtcgaccaaa
tccctccaactcctcgtcgcgaccaccaacaatcaactcgaactctacaccatcacgcac
caccgcgctcaacaacaacaaccacccacgaacaaagactctccggaatacacccgcgcc
ctcgccgtcgacctcccaggccaccgcaccgacatccgcaccctcgccctctcctccgac
gaccgcatgctcgcctccgcctcaaacggccaactcaaactctggaatctcaaaacgcaa
tcatgcctgcgcacattagactgcggtcaagcgctgtgctccgccttcctgcccggcgac
cgcatcgtcctactgggcacgaaaagcggcgacctggagatgtacgatatcgccaccgcc
acgctcatccaaagcctccctgcgcatgaaggtcacgccatctggacgcttgccgtggca
ccggatggtcgcagtgtagtaacaggatccgcagataagaccgcgaaattctggcgtttc
gatgtggtcgacgaggaaatccccgggacgcgaaggacgacacaacgactaactctcacg
cagacgcgggaactcaaactatccgacgacatcctcgctctgacctttagccctgaccac
cgtctcctagccgtcgcaacactggatctaaccgtcaaaatcttcttcgtggacagtctg
aaactgtttctcacgttgtacggccacaaactccccgtcctcgacctgaccatctcgtcg
gatagcaaagtgatagcgacttgctccgcggacaaacacgtgcgtctctggggactggag
tttggcgattgccataaatctttctacgcccacgaggactccgtcatggctgttcgcttc
gtcccgcaccccatcgagcgggaggagggacggttacttttcagtgcgggcaaagacggg
gtgatacggagttgggacggggagaaattcgttccgatccagcgtttgttgggtcacaag
ggagaagtgtgggctatggctgtcagtcgcacgggtgagacggttgtgacggcggggcat
gataagagtctgcgcgtttggggagtgggggatgaccttatctttctcgaggaggagagg
gagagggaggtggaggagttgcacgaacgcagtcttgcggagaatctggaccgggatttt
cgggacgaggatggggatgggaatgaggaggtggcggcggcggggaagcagacgattggg
acgctcacgcatggggagaaggtgttggaggcgttggagttgtgtgtggcggatctggaa
gccatgaacaaccacgaacgggagaagcagcggaacccgaacgcagcaccgccgcagcgg
aatccggtcttcctcgcccgtgggaacgtgacagcgtcgcaatacatgctgcagaccctc
tccgccatcccgacaccggcgctcaatgacgcgttactcgtcatccctttttcctcctta
ccgaacctcttcaccttcctctccatcttcctacgagagcggatgcggccggagttagcc
tggagggttgtgtactttctgctgcaggtgcacatgcagcaaatcgtcgctagtggccat
ctcaagggggtgcttgaggaggtgttggaggcgtgtgagcgctggcaggagggggagagg
cgggtggttgggtgtaatttggcggggctgggggtgctggggagggaggttagggaggtg
gaggtgggtggcgggggatggttgggggatgtggaggtggaagaggaggcggtggagaag
ggggcgcgggggaggaagagggggttcgttggagtagggtag
DBGET
integrated database retrieval system