Baudoinia panamericana: BAUCODRAFT_69588
Help
Entry
BAUCODRAFT_69588 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
bcom
Baudoinia panamericana
Pathway
bcom03013
Nucleocytoplasmic transport
bcom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
BAUCODRAFT_69588
03015 mRNA surveillance pathway
BAUCODRAFT_69588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcom03019
]
BAUCODRAFT_69588
Messenger RNA biogenesis [BR:
bcom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
BAUCODRAFT_69588
mRNA cycle factors
P-body specific factors
BAUCODRAFT_69588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
19116535
NCBI-ProteinID:
XP_007676258
JGI:
Bauco1_69588
UniProt:
M2MIE0
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MAAMERSTKRELKDLNTRAWDREEGVFPVQPSLDSNLKKNTAFIKRLRTAINPAGVSTFL
QEIRSLSLHKYLTEIVSACFEGVSKLKTAGEIAAGVEVVSALHQRFGPDDFTCYLGWLLG
RALSIPDKAQLKALSSDVRDREERERVARQRILLRIATELWLVGVLRSLDDVTRPEEAGK
SRDSGKGLDLAPKARANGVVVHGDAEPFPLEVLKDLLTHDREHVNLPLVVLFVKTFAWDI
LGSKVARNEGRKHVAEDGATVTLNRHADSATSTDEDDPAEKDAPLITPELQQRFRNVLLR
YFDDVKTHLVRDQKQLTAQGKRNAEAYVKSGEVFEDRQANYEKAVKAQEKLVGSAQTLAE
VLGADMPDLAEKDTSSAAFESSIGLVKTGDYLRGQAEGAGIWEDEEERRFYETLTDLKDR
VPGILLEDGRKKKTGADEQVGKKTDETSDAKDATVAHSAEMDDTSTVIVNKTVGAQVDAL
LARLHEFQGKDQVDQFAIDFCFLNSKASRNRLIKAIEEIPKGRTDLLPLYGRLIASLGRY
LIDVPQAIITYLDDEFRSLQRRKSKDFLGQVRMVNVRYIAELTKFGVVPEHVIFHCLKVC
LDDFSRMNIEIIATLLESCGRYLLRNPETSPRMSSFLETLQRKKGAQHLGQQERMLIENA
MYYVNPPERAAIQQKERTPLELFVRQLVYVDLNKKTLERVIKQIRRLHWEESEVQEALRK
IFVKPGKIKYSNIYLLALMLAALWKFHTDFAISVIDELLERITVGLETNDFKYNQRRIAE
VRYLGELYTYRLVDTVIIMDTLYKILNYGHNGYAQPGKVSYLDPPDEYFRIRLVASLLET
CGMYFEKGSLKKKLDFFLAFLQYYTNLKDPLPMDMEFVVQDLYGQLRPQWKLVLNDFTEA
SRVFAEACKQNYQDTAAGKLPEPEEPEEMEPDISDDAHGDGDEAVLPNGAAEDVKSDGEN
AQTSYADITHQAESDEENFVVTRPEEERDPEADAEFDRELAKLMTESVETRRTERKPAFD
VPLPMRRTVQNTASHATDGSGDELPVPAVPNGARTMKFALLSKKGNRQQTRSIDLPSNSS
FAVAMRTQQEAERAEQQRIKNLVLNLDLNDDQHDGAIENPHTTPRFDKSGNTRSKQRARK
LNLGDLDWYSKRSAPASNELLPPPAAQSASLGSYVVDKAAPRGDRGRGGSMRLGGTRDMK
TG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggccgccatggagcggtcgacgaaaagagaactcaaggacctgaacacgcgagcgtgg
gacagagaggaaggtgtgtttccggtgcagccttcactggactccaacctcaagaagaac
acggccttcatcaagcgtttgcggacggcgatcaaccctgctggagtcagcacctttctg
caagagatacgctcactctcgttgcacaagtacttgaccgagattgtatctgcgtgcttc
gaaggggtgtcgaagttgaagacggctggtgagatcgcagctggcgtagaagtggtcagt
gcacttcatcagcgctttggtccggatgacttcacctgctatcttggctggctgctagga
cgagctctaagtataccggacaaggcgcaactgaaggcgttgtcttcggatgtgcgcgac
cgtgaggagagagagcgggtcgctcgtcagcgcatattgctgcgcattgccacggagctg
tggctcgttggcgtgctacgcagtctggacgatgttacgagacccgaagaagccggtaaa
tcgagagacagtgggaaaggcttggatcttgcacccaaagcgagagctaacggcgtggtc
gtccatggcgacgcggagcctttcccgttagaggtgctgaaagatttactcacccacgat
cgggaacacgtcaatttaccactggttgtcttgttcgtcaaaaccttcgcctgggatatt
ctggggtctaaggtggcgaggaacgaaggccgaaagcatgttgctgaggatggcgcaacc
gtcacgctcaaccgccatgccgactctgccacatccactgatgaagatgatcctgctgag
aaggatgcgccgttaattactccggagctccagcaacgctttcgtaacgttctgctcagg
tacttcgacgatgtcaagactcaccttgtgcgtgaccagaagcagttgacagcgcagggc
aagcgcaatgcggaggcgtacgtcaaatccggtgaagtgttcgaggaccgtcaagcaaac
tacgagaaagcggtcaaagcgcaggagaagctcgtcggtagcgcccagactctagccgaa
gtgctgggggccgacatgccagatctggcggagaaggatacatcgagcgctgcgttcgaa
agcagtatcggacttgtcaagactggcgattacctccgcggtcaggcagaaggcgctggc
atttgggaggacgaggaggagcgacgtttctacgagacgcttactgatctgaaagaccgc
gtgccggggatcttgttggaggatggccgcaagaagaagaccggtgcagatgagcaggtg
ggcaagaaaactgatgagacatccgacgcaaaggacgcaacagttgcgcacagcgctgag
atggatgacacttcgactgttatcgtgaacaagacggtcggcgcgcaagttgacgctctc
ctcgcgagactacacgagtttcaaggcaaagaccaagttgaccagttcgctattgacttt
tgcttcttgaactccaaggcatcgcgcaaccgcttgatcaaggctatcgaggagatcccg
aaaggtcggaccgacttactaccactctacggccgtctgatcgcctccctcggccgctat
ctaatcgatgtgcctcaagcaatcattacctatctcgacgatgaattccgtagcctacag
cgccggaagtcgaaagactttcttggtcaagtccgtatggtcaacgttcgatacattgcc
gagctcaccaagtttggtgttgtgcctgagcacgtcatcttccactgcctcaaggtctgc
ttggacgacttctcgcggatgaacattgagatcattgcgactctgctagagagttgcggc
cgatatctcttacgcaacccggagacgtcgcctcgaatgtcatcctttcttgagacactg
caacggaagaaaggtgcacagcatcttggccagcaagagcgaatgctgatcgagaacgcc
atgtactatgtcaatccaccggagcgagccgcaattcagcagaaggagcgcacacccttg
gagctattcgttcgacagctcgtctatgtggacctcaacaaaaagacgctcgaaagggtc
attaagcaaatccgcaggcttcattgggaggaatcggaagtgcaagaagcgctgcgcaag
atcttcgtcaagcctggcaaaatcaagtacagcaatatttatcttctggcgctaatgctt
gccgcgctgtggaaattccatactgatttcgccatctcggtcattgatgagcttctcgaa
cgcattacagttggcttggaaacgaacgacttcaagtacaatcagcgccgcatcgctgag
gttcgctacctgggcgagctgtacacttaccgtctggtcgacaccgtcatcatcatggac
acgctgtacaagatcttgaactacggccacaatgggtatgcgcaaccgggcaaggtgtct
tacctggaccctccagacgaatattttcgcatccgtctcgtcgcttctttgctcgagact
tgcggcatgtacttcgagaaagggtcgctcaagaagaagcttgacttcttcctagcattc
ctgcagtattacaccaacttgaaagacccgctgccgatggatatggagtttgtagtgcag
gatctctacggccagctccgtcctcagtggaagctggtacttaacgacttcacggaagca
agccgggtttttgccgaagcctgcaagcagaattaccaagatactgcagcgggcaaactt
cctgagccagaggaaccggaagagatggagccagacatctccgacgatgcgcatggcgac
ggcgacgaagccgtactgccaaatggcgcggcggaagatgtcaaatccgacggcgaaaat
gcgcagacttcttacgcagatatcacgcaccaagcagaatctgatgaagagaattttgtc
gtgacacgtcctgaggaagagcgtgacccagaggctgacgccgagttcgatcgtgaactt
gccaagttgatgacagaaagcgtggagacccgccggactgaacgcaagcctgcgttcgac
gtgcctctcccaatgcgccgtactgtgcagaacacagcaagtcatgctacagatggcagt
ggtgatgagttgccggtgccagcagtgccaaatggcgcacgcacgatgaaatttgcactt
ctgagtaagaaaggcaaccgccaacagactcgctcaatcgatctgccatccaactcaagc
ttcgctgttgccatgcgcacgcagcaagaagcagagcgggctgagcagcagcgcatcaag
aatctcgtcttaaacctagacctaaacgacgatcagcatgatggcgcaatcgagaatccg
catacgacgcccaggttcgataagtcgggcaatacccgcagcaagcaacgcgcgaggaag
ctgaatttgggagaccttgactggtatagtaaacgttctgcccctgcctccaatgagctg
ctaccgcctccggctgcgcaatcagcatcgcttggcagctacgtcgttgacaaagcggcg
cctcgcggagaccgtgggcgtggtggctcgatgaggcttggcggtactcgtgacatgaag
acaggctga
DBGET
integrated database retrieval system
