Baudoinia panamericana: BAUCODRAFT_71901
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Entry
BAUCODRAFT_71901 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
bcom
Baudoinia panamericana
Pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_71901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_71901
Spliceosome [BR:
bcom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
BAUCODRAFT_71901
Complex C
U5 SnRNP specific factors
BAUCODRAFT_71901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_Syf1_CNRKL1_N
Suf
TPR_2
HAT_PRP39_C
CFAP70_TPR_C
ARM_TT21_2nd
TPR_CcmH_CycH
ARM_TT21_N
NatA_aux_su
TPR_9
TPR_1
TPR_15
ARM_TT21
TPR_4
TPR_NUP160_120_M
Motif
Other DBs
NCBI-GeneID:
19116699
NCBI-ProteinID:
XP_007677008
JGI:
Bauco1_71901
UniProt:
M2NA38
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MSGRKDFLSQPAPENYVAGLGRGATGFTTRSDLGPAREGPSEEQIKEALAKRAAALGTAA
PTAYGVGKKRGDDEADEDQFQDAENEEGLFAMGNYDREDDEADRIYQAVDERMDKRRKAR
REARERAQREDYEAKNPKIQQQFADLKRALGTVSDEDWASIPEVGDLTGKNRRNKQNERQ
RFYAVPDSVLAGARDSTQLGTEVQEDGMMTDAPDGTANDQTDGTVTNFADIGAARSKVMQ
VRLDAAAQAQSNGTDSVAGTSTSIDPKGYLTSLTKTELKAGEVQLGDIKRARVLLESVIK
RNPRHGPGWIAAARLEEYAGKVQAAQNVIRRGTEMCPKSEDVWLEAIRLSQTHGNNHNAK
ILAAKAIENNDRSVKLWIEAMHLEQQSVAKKRVLRKALDHNPNSVAIWKEAVNLEEDPND
AKLLLAKATEIIPLSVELWLALARLETPEQAQVVLNKARKAVPASFEIWIAAARLQEQTG
QTQMVFRVMERGIKALARESAMLKREEWITQAEICEQEGAPLTCQAIIKETLGWSLDEDD
DRKQIWLDDAKASINRGRYETARAIYAYAIRVFYNRKSVWLAAADLERQHGTKQALWEVL
EKAVESCPTSEVLWMQLAREKWQAGDIDEARRVLGTAFQANPGNEDIWLAAVKLEADNGE
TEKARELLKEAREQAGTDRVWVKSVAFERQLKKDSDDALALVNEGLQIYPKAAKLWMMKG
QIYEARNMLPQAREAYNTGTRACSQSVPLWLLLSRLEERMGVLVKARSTLERARLAVKKN
PELWTESVRLEYRAKNMAAANQKMAQALQECPTSGLVWSERIWHLEQRTQRKPRILEAIQ
KAENDPILFVTAARIFWGERKLDKADSWFQKAAILDPDYGDTWAWWYKFLVQHGTDERRE
EVVARCVQTEPKHGEMWAAVRKHPDNAGKSVEEVLKIVAARLE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgcaaggactttttgtcgcagccggcgccggagaattatgtcgcaggtctc
gggcgtggtgcgacgggctttaccacccgatcagatctgggtccggcgcgggaaggacca
agtgaggaacagatcaaggaggcgcttgcgaagcgtgctgcagcattaggcactgcggcg
ccaacagcatatggcgttggtaagaagagaggggatgacgaagcggacgaggaccagttt
caggatgccgagaacgaagaggggctgtttgccatgggcaattacgaccgcgaagacgac
gaggcagaccgcatctatcaggccgtggacgagcgcatggacaagcgaaggaaagcgcga
agggaagcacgtgagcgtgcgcaacgcgaagactacgaagccaagaatccaaagatccaa
caacagtttgccgacctaaagcgagcgcttggcacagtatcggacgaagactgggcgagc
attccagaagtcggagacttgacaggcaagaaccgacgcaacaagcagaacgagcggcag
cgcttctacgccgtgcctgacagcgtgctagctggtgctagagacagcacgcaactcggc
accgaagtgcaggaagacggcatgatgaccgacgcaccagacggcacggcgaatgatcaa
accgacggcacggtgactaacttcgccgatattggcgcggcgcgcagcaaggtcatgcag
gtccgcctggacgctgcagcacaagcccaaagcaacggtacggattccgtggctggcacg
agcacgagcatcgatccgaaaggctaccttaccagtctgaccaagactgagttgaaggcg
ggcgaggttcagcttggtgatatcaagcgtgctagggtgctgttggagtcggtcatcaag
cgcaatccacggcacggcccaggctggatcgctgcggcgcgattggaggagtatgccggc
aaggtgcaggcagctcagaatgtcattcgaagaggtaccgagatgtgtccgaaaagcgaa
gacgtctggttggaagcgatccgtctctcgcaaacgcacggcaacaatcacaacgccaag
attctcgctgccaaagctatcgaaaacaatgacaggtcggtcaagttgtggattgaggct
atgcatttggagcagcagtcggtagcgaagaagcgtgtactgcgtaaagctctcgaccat
aaccctaactctgtggccatatggaaagaagctgttaatctcgaagaagatccgaacgac
gccaagctactacttgcgaaggctacggagatcatcccgctgtctgttgagctctggctc
gcacttgccagactggagaccccagagcaagcgcaggtcgtgctgaacaaagctcgcaaa
gctgtgcctgcgagtttcgagatttggattgctgcagctcgcctacaggagcagacgggc
cagactcagatggtatttagagtgatggagcgcggtattaaagccttggcacgagagtca
gctatgttgaaacgggaagagtggattacgcaagctgagatctgcgagcaagagggcgcg
ccgctgacgtgtcaggccatcattaaggagactctaggttggagtctggacgaagacgat
gaccgcaagcagatatggctcgacgacgcaaaggccagcattaaccgtggtcgatacgag
acagcaagagcgatttacgcgtacgctatccgcgtgttctacaaccgcaagagcgtgtgg
cttgctgcagcggaccttgagagacagcacggcacgaagcaagctttgtgggaagttctc
gagaaggctgtcgagtcttgcccgacaagcgaggtgctgtggatgcagctggcacgcgag
aaatggcaggcaggcgatatcgacgaagcacggcgggtgctgggaactgcattccaagcc
aaccccggcaacgaagacatttggcttgcagcagttaaactcgaggccgacaatggcgag
acggagaaagcaagggagctgctcaaggaggctcgggagcaagcaggaactgatcgtgta
tgggtcaagagtgtagctttcgagcgccagctcaagaaagactcggatgatgcgctagcg
cttgtcaacgaaggcttgcagatctaccctaaagcggccaagctgtggatgatgaagggc
cagatctacgaggcgaggaatatgctcccgcaagcgcgcgaagcatacaacaccggtacc
cgagcttgttcacaaagcgtgccgctctggcttctccttagtaggctcgaagagcgtatg
ggtgtgctggtcaaggctcgctcaacgctggagagggcgaggttggcagtgaagaagaac
ccggaactttggaccgagagtgtgcgcctcgagtaccgcgcgaaaaacatggccgctgcg
aatcagaagatggcgcaagcgttgcaagagtgtccaacttctggccttgtctggagcgag
aggatttggcatctcgagcagcgcacgcaacgaaagcctcgcatcctcgaagctatccag
aaggcggagaatgatcctatcctcttcgtcacggcagctcgcatcttctggggtgagaga
aagctggacaaggcggactcttggtttcagaaagcggctattctggacccggactacggt
gatacttgggcatggtggtataagttccttgtacagcatggcacggacgagaggagagaa
gaggtggtggcgcggtgcgtgcagacggagcccaagcacggagaaatgtgggcggcagtt
agaaagcatccggacaatgcgggaaagagtgttgaggaggtgctgaagatcgttgctgcg
aggttggagtga
DBGET
integrated database retrieval system