Baudoinia panamericana: BAUCODRAFT_78972
Help
Entry
BAUCODRAFT_78972 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
bcom
Baudoinia panamericana
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcom03016
]
BAUCODRAFT_78972
Transfer RNA biogenesis [BR:
bcom03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
BAUCODRAFT_78972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
19117228
NCBI-ProteinID:
XP_007681020
JGI:
Bauco1_78972
UniProt:
M2MY12
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MADLDEDALLTSAPTADEIDLSEETQDFRFLSAFGTNEVKIPKRGEKDFEQHGTNLQSDT
LAASRQAMHNALSFQRVHQPKGYTMATYHPESNMAYSYNPKGPLFARMGQVLSALEDPLG
NDERRGQRLWLLPEELIYLLERGTIDVRWPVSEDDEDDRALPMSVQAAYAMCIGGTLTLE
RHIVYSSLKRAGYIVLRSADFNGSGPSPGTECYPPLPDRTWRGLHHGRDGCLLQPALYRS
YADIYSRLALVQFHDPTTQRPQPSNLPVTIPTDLHQPLSSISVTYNIWKPGTTMFKKSSP
GTPDFRIAVVNARETKVPSLQQLSSLMEAVPYEPPKQDAQLYQKLKHGYKNVILAIVDQG
VVSYLRLADAAFGRERLYGSKSPRPGFKHGGSRKRGQKRR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctggatgaggacgccctgctaacgtccgcgccaactgcagatgaaattgac
ctttccgaagagacgcaagatttccgctttctctctgctttcggaacgaatgaggtcaag
atcccgaagcgaggcgaaaaggactttgaacagcatggcacgaatctccaatccgacacc
ctcgccgcctctcggcaggccatgcataatgccctctcgtttcaacgggtgcaccagccg
aaagggtacacaatggcgacctaccaccccgagtccaacatggcttacagctacaacccg
aagggcccgctcttcgccaggatgggccaggtcctttcggccttggaagatccactaggc
aacgacgaacgacgtggtcaacggctatggttgctgccggaagaactcatttaccttctc
gaacgagggactattgatgttcgctggccggtgagtgaggatgacgaagatgatcgagca
ctgccaatgagcgtgcaggccgcttatgctatgtgcattggcggcacgctgactctggaa
cgtcacattgtttactccagtctcaagcgagcaggatatatcgtcctgcgatcggccgac
ttcaacggctccgggccatctcctggtacggagtgctatccgccattacccgacagaacg
tggcggggactgcatcatggccgtgacggctgtttgttgcaaccagcgctctaccgcagc
tacgccgacatctacagtcgtctcgccctcgtccaattccacgacccgaccactcaacga
cctcaaccgtcgaacttgccagtaaccattccaaccgacctgcaccagcctctttcctct
ataagcgtaacgtacaatatctggaaacccggcaccacaatgttcaagaagtcctctccc
ggcacgccggactttcgcatagccgtagtcaatgctcgcgaaaccaaggtgccaagcttg
cagcagctgagtagcttgatggaggcggtaccttacgagccgcctaagcaggacgcgcaa
ctttatcagaagttgaaacacgggtataagaacgtcatccttgcgattgttgaccaaggt
gtggtaagctatttgaggctcgctgatgctgcgttcgggagggaaaggctgtatggaagc
aagagtcctaggcctggattcaagcatggagggagcaggaagaggggccagaagcggaga
tga
DBGET
integrated database retrieval system
