Baudoinia panamericana: BAUCODRAFT_79257
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Entry
BAUCODRAFT_79257 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bcom
Baudoinia panamericana
Pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_79257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_79257
03009 Ribosome biogenesis [BR:
bcom03009
]
BAUCODRAFT_79257
Enzymes [BR:
bcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BAUCODRAFT_79257
Spliceosome [BR:
bcom03041
]
Complex A
U2 snRNP components
U2 related factors
BAUCODRAFT_79257
Complex B
BAUCODRAFT_79257
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
BAUCODRAFT_79257
Ribosome biogenesis [BR:
bcom03009
]
Eukaryotic type
90S particles
Helicases
BAUCODRAFT_79257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
AAA_19
SRP54
Flavi_DEAD
T2SSE
nSTAND3
ABC_tran
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
19117247
NCBI-ProteinID:
XP_007681039
JGI:
Bauco1_79257
UniProt:
M2MZQ5
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MAEEKQPSRFKRQKMVDDRDNPYLAHIYEDEQHDSGVSLSGDSSTNGHLNGSTSNGNGPA
LKRHATTAKQAKVAEDGPTNFFSGGHLSERYFGILKKRRDLPVHAQRQEFLDMYQKSQIL
VFVGETGSGKTTQIPQFVLFDDLPQQQGKMVACTQPRRVAAMSVAQRVAQEMDVTLGEEV
GYSIRFEDMTGPKTILKYMTDGMLLREAMNDHDLTRYSTIILDEAHERTLATDILMGLLK
EVVKRRPDLKLIIMSATLDAQKFQKYFMNAPLLAVPGRTHPVEIFYTPEPERDYVEAALR
TVLQIHATEPEGDILLFLTGEEEIEDACRKINLEGDEMVREADAGPLKVYPLYGTLPPAQ
QQRIFDPAPPPFKPGGRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVES
LLVSPISKASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIDQSYPEILRSNLASTVLELK
KLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTNMGKLASEFPLDPALAVML
IASPEFYCSNEILSLTALLSVPQLFVRPASARKRADEMKDLFAHADGDHLTMLNVYHAFK
APSAQENAKQWCHDHFLSFRALQQADNVRLQLKRIMERSEIELVSTPFTDKKYYENIRRA
LVAGFFMQVAKKDSSNKTYTTVKDNQSVLLHPSTVLGQDSEWVVYNEFVLTSKNYIRTVT
GVKPEWLLEIAPQYYDLEGFSKGDIKTSLLRVQQKVQRRAQINGGR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagaagcaaccgtctcgcttcaagcggcagaagatggtcgacgatcgcgac
aacccgtacttggctcacatctacgaggacgagcagcacgactccggcgtctcgctcagc
ggcgactccagcacgaatggacacttgaacggcagcacatcaaatggcaacggaccggca
ctgaagcgacatgctacgaccgcaaagcaagcaaaggtcgctgaagatggaccgaccaac
ttcttcagtggtggtcacctctcggagcgctactttggcatcctcaagaagcgtcgagac
cttcccgtgcatgcgcagaggcaggagttcctcgacatgtaccagaagtcgcagatactc
gtctttgtgggtgagacgggttcgggaaagacgacgcagatcccacagtttgtcctcttt
gacgacctgccgcagcagcagggcaagatggtcgcttgtacccagccgagacgtgtggct
gccatgtccgtagcgcagcgtgtcgcgcaggaaatggacgttacgttgggtgaggaagtg
ggttacagcattcggtttgaagatatgaccggcccgaagacgatattgaagtacatgacg
gatggaatgttattacgggaggcgatgaacgatcacgaccttacgcgctacagcacgatt
atcctcgacgaagcgcacgaacggacgttggcgacggatattttgatgggattgctcaag
gaagtggtcaagcgcagaccagacctcaagctcatcatcatgtctgcgacattggacgcg
caaaagtttcagaagtacttcatgaacgcgccgttactcgctgtaccgggccgtacgcac
ccagtcgagatcttctacacgccagagccggaacgcgattacgtcgaggccgcgctgcgt
acggttcttcagatccacgccacggaaccagaaggagatattcttctcttcctgaccggc
gaagaggagatcgaagacgcctgccgcaagatcaacctcgaaggagacgagatggtccgc
gaagctgatgctggacctctcaaagtctaccctctctacggcaccttacctccagcccaa
caacagcgcatctttgaccctgctccaccgccatttaaacccggcggtcgcccaggccgc
aagtgcatcgtcagcaccaacatcgccgaaacctcactaacaatcgacggcatcgtctac
gtcgtcgaccccggcttcagcaagcagaaagtctacaaccctcgcatccgcgtggaatct
ctcctcgtcagcccaatctccaaagcctccgcccagcagcgcgccggtcgtgcgggccgt
acgcgtcccggcaaatgcttccgcctctacaccgaaggcgccttcaagaaagagctaatc
gaccagtcataccccgaaatcctgcgctcgaacctcgctagtaccgtgctcgagctgaag
aaactaggcatagacgacctcgtgcacttcgacctgatggacccacccgccccggaaacc
ttaatgcgcgcactagaagagctcaactacctcgcctgtctcgacgacgaaggcgagcta
accaacatgggcaaactcgcctccgaattccccctcgaccccgcgctggcagtgatgcta
attgcctcccccgaattctactgcagcaacgaaatcctctccctcaccgccctgctaagc
gtgccccaactcttcgtccgcccggcctccgcccgcaagcgcgccgacgaaatgaaagac
ctcttcgcccacgccgacggcgaccacctcaccatgctcaacgtctaccacgccttcaaa
gccccgtccgcgcaggaaaacgcgaaacaatggtgtcacgaccacttcctctccttccgc
gcgctacaacaggccgacaacgtgcgtctgcaactcaaacgcatcatggaacgctccgag
atcgaactcgtctccacccccttcaccgacaagaagtactacgagaacatccgtcgcgcg
ctggtggcggggttcttcatgcaagtcgccaagaaggattcttccaacaagacgtacacg
actgtgaaggataatcagagtgtcctcctgcatccgtcgacggtgttggggcaggatagc
gagtgggtcgtttacaacgagtttgtgttgacgagtaagaattacattcgtacggttacg
ggggtgaagccggagtggttgttggagattgcgccgcagtattatgatttggaggggttt
agtaagggtgatattaagacgagtttgttgagggtgcagcagaaggtgcagaggagggcg
cagatcaatggtgggaggtag
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integrated database retrieval system