Baudoinia panamericana: BAUCODRAFT_85149 Help Entry BAUCODRAFT_85149  CDS       T03106                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism bcom  Baudoinia panamericana Pathway bcom03020   RNA polymerase bcom03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:bcom00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     BAUCODRAFT_85149   09124 Replication and repair    03420 Nucleotide excision repair     BAUCODRAFT_85149  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bcom03021]     BAUCODRAFT_85149    03400 DNA repair and recombination proteins [BR:bcom03400]     BAUCODRAFT_85149 Enzymes [BR:bcom01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      BAUCODRAFT_85149 Transcription machinery [BR:bcom03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      BAUCODRAFT_85149 DNA repair and recombination proteins [BR:bcom03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       BAUCODRAFT_85149 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Med27 Motif Other DBs NCBI-GeneID:  19117420 NCBI-ProteinID:  XP_007673801 JGI:  Bauco1_85149 UniProt:  M2N508 LinkDB All DBs Position Unknown AA seq 1789 aa AA seqDB search MSNYTFPHSDAPLKTVQEIQFGLFSPEEIKNMSVCHIEYPETMDEQRHRPREKGLNDPKL GSIDRGTQCATCKEVPEICPGHFGHIELAQPVFHVGFIIKIKKILESVCHNCGKILADES NPAFAQAIRLRDPKRRFEAVHKICKGISICQVDAPPEDDGGYGPDPKAALKVKGHGGCGN AQPIIRKEQLRLNGTIKVAKSDEDEKGSKAESEKIPITPQYALNVFRAISDEELARLGLN ADYARPEWMVLTVLPVPPPAVRPSISVDGTSQGMRSEDDLTYKLSDIIRANSNVRRCEME GSPQHVTEEFVQLLQFHVATYMDNDIAGVPRALQKSGRPVKSIRARLKSKEGRLRGNLMG KRVDFSARTVITGDPNLDLDQVGVPRSIAKTLTFPETVNAYNIQKLQELVRNGPNEHPGA RYVIRGEGERIDLRRAKNDVQLQYGWKVERHIVDGDYIIFNRQPSLHKESMMGHRVKVMP YSTFRLNLSVTSPYNADFDGDEMNLHVPQSHETRAEVSELCAVPKNIVSPQKNGPLMGIV QDTMAGIYMMTRRDVMIDYENVMNILLWLPNWDGVVPQPAILRPKPMWTGKQIISLALPA GLNLQRMDDENTPHIPLKEKKGLLVQNGDLVLGRFVKKIVGASQGGVVHYIFNDNGSEGP KAAVEFFNAAQRVVCYWLLHNGFSVGIGDTVPNQDMANKIEAAVQKEKDQLLELVKTVEN NELETLPGMTIRETFESKAKSFLDNARNNAGDIAFNGMRACNNVGTMVQSGSKGSSTNVS QMTAAVGQQSLEGKRLPFGFKYRTLPHFPKDDYSPASRGFVENSYLRGLTPHEFFFHAMG GREGLIDTAVKTAETGYIQRRLVKALEEVMVKYDGTVRNSMGDIVQFIYGEDGLDAMCIE PQTLDIITASAAAFDKKYKIDIINPASKDLMLTNDMLEMADEIRGDVDVQRLFDEEFEQI SNDRDKIRKGLGPDEADQSRQLPLNVDRMIRNAKDRFKIKDGARSNLDPRYAVPKIKEML DRLIIVRGDDPLSIEADLNATLLCKANFRSRLAFKRIVKDDSLNRDALDNILGDIESRFS RALASPGEMVGVLAAQSIGEPATQMTLNTFHLAGVTAKTTTKGVPRLKEILNVAENLKTP QMKVYQLPEDKLSQEKCKELRSKVEHTSLRNVTDETQIHYDPDITSTTVEEDRDMVESYF IIPEDSAEPIELQSKWVLRIVLGRRQLLDKGLTVTDVGHAIKEHFGQDTAVVFSDDNADE QVVRVRLLQRGAGKMDEDEDVDESPEDMLRRLESHMLDSVALRGVKNVKRCFVSSETVMR EKPDGSLVKSKSDDLCKEWLLDTDGFNLKETLSVTGVDPTRTTCNHFGEIFRCFGIEATR AALMRELSAVLTGDGSYVNYRHMAILCDVMCARGTLMAVTRHGINRADTGALMRCSFEET VEILFEAASSGELDDCRGVSENIILGQLAPSGTGEFDILLDQEMLKTVVSAQRPIGAAAM GAASPMDGAATPYDMGSPLAEGGYAGGPDYSASFSPIIDAGQADSGGLTGYGGGFGGASP YSGGMSPGYAPTSPFSSGMSPTSPGYGYSPTSPAGYSPTSPGFDGATSPVYHVTSPRFSP ASPAYTPTSPTYSPTSPVYHGGNKVSPTSPSYSPTSPSYSPTSPNYSPTSPNYSPTSPAH QPGSATSPKYSPTSPQYSPTSPQYSPTSPQYSPTSPTYSPTSPKYGSGVGPSGTSPTSPN YSPTSPVYSPTSPAVNGYSPTSPGHSGNNPKYSPTSPQYSPTYVAILSL NT seq 5370 nt NT seq  +upstreamnt  +downstreamnt atgtcgaactacactttcccgcactccgatgcgcctctcaagacggtgcaggagatccag ttcggcctgttctcacccgaagagatcaagaacatgagtgtctgtcatatcgaataccct gagacaatggacgagcagcgccaccggccacgcgaaaagggcttaaatgacccaaaactt ggttccatcgaccgcggtacgcagtgtgccacctgtaaggaggtacccgaaatctgcccg ggtcactttggtcatatcgagctcgcgcagccggtcttccacgtcggcttcatcatcaag attaagaagatcctggagtcggtgtgccataattgcggcaagattctggctgatgagagc aaccccgcatttgctcaggccattcgcctccgcgatcccaagcgccgcttcgaagccgtc cataagatttgcaaaggcatcagcatttgtcaggtcgacgcgcctcccgaagacgatggt ggctacggtccagacccgaaggcggcgctaaaggtcaaaggccacggtggctgtggcaat gctcagcctatcattcgtaaagagcagcttcgtttgaacggcaccatcaaagtcgcgaag agtgatgaagacgagaaaggctcaaaggccgagtcggaaaagattccgatcacgccgcag tatgcgcttaacgtcttccgcgcgatctcggacgaggaactggctcgcctaggcttgaac gccgattacgctaggccagagtggatggtcctcaccgtgctgcctgtcccacctcctgca gtacgtccttcgatctccgtcgacggtacgagccagggtatgcgctccgaagacgacttg acctacaagctctcagacatcatccgcgcaaactccaacgttcgtcgctgcgagatggag ggctcgcctcaacacgtcactgaggagttcgtccagctgctacagttccatgtggcaacg tacatggataacgacattgctggcgtaccgagggcactacaaaagagcggaaggcctgtc aagtccattcgcgctcgtcttaagtcaaaggagggccgtctgcgaggcaatctcatgggc aagcgtgtcgacttctccgcgcgtaccgttatcactggtgatccaaaccttgatcttgac caagtcggcgtgcctcgctcaatcgccaagacgttgacattcccggaaacggtgaatgct tacaacatccagaagctgcaggagctcgttcgtaatggacctaacgagcaccctggcgcc cgctacgtcattcgaggcgaaggcgagcgtattgacctgcggcgtgcgaagaatgatgtt cagctacaatacggctggaaggtcgagcggcacattgtcgacggcgactacatcatcttc aaccgccagccgtcgctgcacaaggagtctatgatggggcaccgtgtcaaagttatgccc tactcgactttccgattgaacctgtcggtcacctcaccgtacaacgccgactttgatggc gatgagatgaatttgcacgttccgcaatcgcacgagactcgtgcggaagtaagcgagctt tgcgccgtgccgaagaatattgtgtcgccccagaagaacggtccactgatgggtattgtg caagacactatggccggtatctacatgatgacccggcgtgacgtgatgatcgactacgag aatgtcatgaacattctcttgtggctgccgaactgggacggagtggtacctcaacccgcc atcctcaggccaaagcctatgtggaccggcaagcagataatatcgcttgcgcttccggca gggctcaacctccagcgcatggacgacgagaatacaccgcatatcccgctcaaggagaaa aagggattgcttgtacagaacggcgacctagtgctgggtcgcttcgttaagaagatcgtt ggtgcttcgcaaggtggtgttgtacactacatcttcaacgataatggcagtgagggtccg aaagcggccgttgagttcttcaacgccgcgcagcgtgttgtctgctactggctactgcac aatggtttcagtgttggcattggcgacaccgttcccaatcaggacatggcaaacaagatt gaggcggctgtccagaaggagaaagatcagctactcgagcttgtcaagacggtggaaaat aacgagctggagaccttgcccggcatgacgatccgagagacgtttgaatcgaaagctaaa tcgttcctggacaacgcccgcaacaacgccggcgacatcgcattcaacggtatgagagct tgcaacaatgtcggcaccatggtgcagtctggttcgaagggttcgtccacgaatgtctct cagatgacggcagctgtgggtcagcagtcactggagggcaagcgcttgccgttcgggttc aaataccgcacccttccgcacttcccgaaggatgactactccccagcatcaagaggcttc gttgaaaactcctacttgcgtggcttgacaccacatgaattcttcttccacgcgatgggt ggtcgtgaaggtctcatcgacacagctgtcaagactgccgagaccggttacattcagcgt cgtctggtcaaagctctcgaagaggtcatggtcaagtacgatggcactgtccgcaactcc atgggtgacattgtgcagttcatctacggcgaagacggtcttgatgcaatgtgcattgag cctcagacgctcgacatcatcacggcgagcgctgctgcctttgacaagaaatacaagatt gacattatcaacccagcgtcgaaagatctcatgctcactaacgacatgctggagatggct gatgagattcgtggcgatgtcgatgtgcagcggctcttcgatgaggagtttgaacaaatc tccaacgaccgtgacaagattcgtaaaggcctgggtccagacgaggcggatcagagcagg cagttgccactcaacgttgaccgtatgatccgaaacgcaaaggatcgctttaaaatcaaa gatggcgcccgcagcaaccttgatccgaggtacgctgtgccgaagattaaggagatgctt gacaggctcatcatcgtgcgcggcgacgacccgctgtcgatcgaggccgatcttaacgca acgctgctgtgcaaggcaaacttccgatcaaggctggcattcaagcgtatcgttaaggat gattcgcttaaccgggatgcgcttgacaacatccttggtgacattgaaagtcgcttctca cgcgccttggccagtcctggcgagatggtgggtgtgcttgcagcgcagtccatcggtgag ccggccactcagatgactttgaacacattccacttggctggtgtgactgcaaagaccacc accaagggtgtgcctcggctgaaggagattctcaatgtggcagagaacctcaaaacgccg cagatgaaggtgtaccagctgccagaggacaagctgagccaagagaaatgcaaggagctt cgatcgaaggtggagcatacgtcgcttaggaacgtgacggatgagactcagattcactac gatccggatatcacctctacgaccgtcgaagaggaccgtgacatggttgaatcctacttc atcatccccgaagactccgccgagccgatcgagcttcaaagcaagtgggttctgcgcatc gttctcgggcgccgtcagctacttgataagggcctcaccgttaccgacgttggccatgcg attaaagagcacttcggccaagacactgctgtcgtcttctccgatgacaatgctgacgag caagttgtccgtgtacgcctgttgcagagaggggccgggaagatggacgaggatgaggat gtcgacgaatcacccgaagacatgctccggcgcctggagagccacatgcttgactcggtg gccttgcgtggtgttaagaacgtcaagcgttgcttcgtcagctccgagactgtcatgcgt gagaagcctgatggctcgctcgtgaagagcaagagcgacgatctctgcaaagagtggctt ttggataccgatggcttcaaccttaaggagaccctctcagtgacgggtgtggacccgacc cgcacgacctgcaaccacttcggcgagatcttcaggtgcttcggcatcgaagctacacgc gcggcgcttatgagagagctcagcgccgtgctgacaggtgacggctcgtacgtcaattac cgtcacatggccatattgtgcgatgtcatgtgtgctagaggcacgctgatggctgtcacg aggcatggtatcaatcgtgcggatacgggtgcgctgatgcggtgctccttcgaagagact gtagagatcctgttcgaagctgcttcttctggcgagttggacgactgcaggggtgtctct gaaaacatcatcttgggtcagttggcaccttctggtactggtgaatttgacatcctgctt gatcaagagatgctcaagaccgtcgtttcggctcagcggcctattggggctgcggctatg ggtgcagcaagcccgatggacggtgccgctacgccatacgatatgggttctccgcttgcc gagggcggctatgcgggtggaccggattacagcgccagcttctcgcccatcattgatgct ggccaggcggactctgggggccttactggttatggtggtggctttggcggtgccagccct tactctggcggtatgagtccaggctatgcgcccacgagtccattcagcagcggcatgagt ccgacgtcgcctggctatggctactcgcctacctcaccggccggctactcaccaacttcg cctggcttcgacggcgcgactagcccggtgtatcacgtcacgagcccacgcttttcccca gcaagtcctgcatacacgccgacctcgccgacctattcgccgacctcacctgtctaccat ggtggcaacaaagtgtccccgacgtctccatcttactcccctacgtcgccttcatattct ccgacctcgccgaactacagcccgacgtcaccgaactactcaccgacttcgcccgcacac cagcctggctcggccacgtccccgaagtactcgccgacttcgccgcagtactcgccaaca tcgccgcagtacagccctacatcaccgcagtactcacccacatcgcctacatattcaccc acgagcccgaagtacgggagtggtgtaggcccttctggcacgtcacctacgtcgccaaat tacagtccgaccagcccggtgtacagcccgacaagtccagcggtgaatggctactcgcca acatcaccgggtcatagtgggaacaatccgaagtactcgccgactagcccacagtactct ccgacgtacgttgccattctctcactctga

DBGET integrated database retrieval system