Baudoinia panamericana: BAUCODRAFT_95810
Help
Entry
BAUCODRAFT_95810 CDS
T03106
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bcom
Baudoinia panamericana
Pathway
bcom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bcom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BAUCODRAFT_95810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bcom03041
]
BAUCODRAFT_95810
03009 Ribosome biogenesis [BR:
bcom03009
]
BAUCODRAFT_95810
Enzymes [BR:
bcom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAUCODRAFT_95810
Spliceosome [BR:
bcom03041
]
Complex A
U1 snRNP components
U1 related factors
BAUCODRAFT_95810
Complex B
BAUCODRAFT_95810
Ribosome biogenesis [BR:
bcom03009
]
Eukaryotic type
Pre-60S particles
Helicases
BAUCODRAFT_95810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
Motif
Other DBs
NCBI-GeneID:
19117500
NCBI-ProteinID:
XP_007680040
JGI:
Bauco1_95810
UniProt:
M2M8E8
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MSSLGAGLKTQTWDLNAMPKFEKSFYKEDPAVAARSQAEVDAFRREHQITVQGRDVPKPV
ETFDEAGFPGYVMNEVKAQGFSKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI
VHINAQPLLAQGDGPIVLILAPTRELAVQIQEEVSKFGKSSRIRNTCVYGGVPKGGQIRD
LARGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDR
QTCMWSATWPKEVRQLASDYQTNFIQVNVGSHDLHANMRITQIVEIVSDFEKRERMQKHL
ERIMEDKNNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSP
IMVATDVASRGIDVKDITHVFNYDYPNNSEDYVHRIGRTGRAGRMGTAITMFTTDNSKQA
RDLVSVLSQAKQEIDPRLAEMARYGGGGGGGGGRGYGGGRGGGRGGGRGGWTGSNTAPIG
GSRRW
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccttggtgctggactcaagactcaaacctgggatctgaatgctatgccgaag
tttgaaaagtcgttctacaaagaggatcctgccgtggctgcacgctcacaagccgaggtc
gatgcattccgcagagaacaccaaattacggtacaaggtcgcgacgtgccgaagccggtg
gagaccttcgacgaggctggcttcccgggatacgtcatgaacgaagtcaaggcgcaaggt
ttctcaaagcccaccgcgatccaatctcaaggctggcccatggctctctccggtcgtgat
gtcgtcggtattgccgagaccgggtctgggaagacgctcacctactgcttacccgccatc
gtccacattaatgctcagccacttcttgcacagggtgacggtccgattgtcctcatccta
gcacctacccgtgagctagccgttcagatccaggaagaagtcagcaaattcggaaagtcc
tcaaggatacgaaacacctgtgtctatggcggtgttccgaaaggtggacagatccgcgac
ctcgctaggggcgttgaagtgtgcatcgccacacctggacgtttgatcgacatgctcgag
tcaggcaagaccaacctccgtcgtgtaacttacctggtgcttgatgaggcggaccgcatg
ctcgacatgggtttcgagccgcagatccgcaaaattatcggccagatcagacctgatcgt
cagacctgcatgtggtccgctacctggccgaaggaggttcgccagctggcctcagactat
caaacaaacttcattcaagtcaatgtcggctcgcacgatctgcacgctaacatgcgcatc
acgcaaatcgttgagatcgtgtcggatttcgagaagcgcgagcgcatgcagaagcacctt
gagcgcatcatggaggacaagaacaacaagattctcatcttcaccggcacaaagcgtgtc
gctgacgatattactcgcttccttcgtcaagacggatggccagcgctttcgattcacggc
gacaagcagcagaacgagcgcgactgggttctcaatgaattcaagacgggcaagagccca
atcatggttgccaccgatgtggcttcccgtggcatcgacgtcaaggacattacgcatgtg
ttcaactacgactacccgaacaactcggaggactacgtccaccgtattgggcgtacaggg
cgtgccggccgcatgggcactgccatcaccatgttcactactgacaactccaagcaggct
cgtgacctagtgagcgttctttctcaggctaagcaggagatcgatccgcgtctcgctgag
atggctcgctacggcggcggcggtggcggaggaggaggccgtgggtacggtggcggtcgc
ggaggtggccgtggtggtggtcgtggcggctggactggcagcaacacggcaccaatcggt
ggaagccgtcggtggtga
DBGET
integrated database retrieval system
