Burkholderia contaminans: NL30_01205
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Entry
NL30_01205 CDS
T03969
Name
(GenBank) type IV secretion protein Rhs
Organism
bcon
Burkholderia contaminans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
PAAR_motif
DNase_NucA_NucB
Beta-prop_IFT140_1st
prePAAR_I
Motif
Other DBs
NCBI-ProteinID:
AKM38618
LinkDB
All DBs
Position
1:292246..296553
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AA seq
1435 aa
AA seq
DB search
MSAENFAAARFEDPIQHTTLMGELVGTVGSVVGGAIVGALVAEAMEGLIFAGLAALEIGT
AGLATPLVIAIGVGVAVGSGALMEASGMNDAIDEGAKSLANSIVPPVIKGKIASGSGNVY
VNNKPASRAAKPGDLDTVACTDHPGPQMIADGSGSVYINDQPAARVGDKTTCDGTIAEGS
DNVFIGGGTQRVRDVKSATRLGWLGAALGIALAVCGRGKMSWGDFLKSKAPCIAMNFAAG
AFGTWLGSLARPSAGHPVNVITGSKVLDGTDDTDFVLPGPLPIVWQRFYSSLDDRADSLF
GTGWSVPISVELRLAREHGEVASITYWDEQGRDIVFPAVPPGESHFSVPEGIYLICTEGG
HYVVETVDGMYRDFGRARTDADSEALKLWRLEDRNGNWIEVEREAHDEVVRPVRLHDSAG
RLLTLSYDKLHPQRIGAIELTRGVDGEQPDTLVRYAYSNAGELVAVTDRSGHIGRRFAYE
HGLMVQHTLRGGLQCFYAWQGVGRDARVVRHWTDDGEAYTFDADLAQRAVTITDQIGRVT
RWTWNEDQQPTSHTDAEGHVWRLEWNAKRQLVSTTDPAGNTTRFEYDERGRQTQRIDALG
QVERTEWNGYYDLPVAETDPANSRWIYRYDDRGNLTMTRDPAGFATEYHRDERGLVHTIR
DARGGYKFLEWNGRAQLTSYTDCSGKVTRFAYDARGALARVTDAAGQSTVYETDAMGRVT
GIGTADGARQTFRYDVAGRLVEVVDANQRSTRYEINPRGLLLSRTDAANRVVRFGYDDAF
RLASLTNENRESYRFQYDRRDLAAAQIGLDGHKRTYEYDVCGQGTIVRDGKIETRYERDA
IGRLTAKQATHERCEYLYDKASRIASAELYTLAARGPLLKNRVSLKYGARGEVLEEYTPT
GWLAHTYDELGNRVSTTISGERTIDWLHYGSGHVHQIRVDGAAVADIERDDLHREVLRTQ
GKLTSHFGYDAVGRRARHVAQRGRAADELLAKQWQYDAVGDVIQKRDLRHGTTSYRYDPT
GRIEQAAGPGLPSEVFRWDAAANLVSSDHPGGFVEHNRLKVFEDKRFEYDVYGRLVRKLS
GHGPAKELVLEYDDWNQLKTVVAKDRLGVGTTHFEYDAFGRRIRKLNGGYASTDFLWDGM
RLVQETYHDRQGEEELTYLYESNSYVPLARIDQGKTAANDDNARDAVYYFHNDVSGLPEE
LTNADGELVWQARYKVWGNAVQEEWVARAPQRPTAVWGEVQATAPVPSRAPRPQNLRFQG
QYLDRETGLHYNTFRFYDPDVGRFINPDPIGLNGGHNLYRYTPNPITWIDPWGWAGCTLT
KAKAKDYDYTLRLKRSEYPQTFGHISDAIDNGHADIVTVQRGSAKLNRKVSLAGVKTKAG
MDRDEWPMAMFKEGGNGASVRYIDPSDNRGAGSSIGNVLSDLPDGTRVKVEIYDE
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcggagaacttcgcggccgctcgcttcgaagatccgatccagcacacgacgttg
atgggggagcttgtcggcacggtcgggtccgtggtcggcggcgccatcgtcggtgcattg
gtggcagaggcgatggaggggctgatcttcgccggcctcgctgcgctcgaaatcggcacg
gccgggttggcgacgccgctcgtgattgcgatcggcgtgggcgtggcggtcggctcgggc
gcgttgatggaagcgagcggcatgaacgatgccatcgacgagggcgcgaagtcgctcgcc
aattcgatcgtgccgcccgtgatcaaaggcaagatcgcaagcgggtcggggaacgtctac
gtcaacaacaagccggcctcacgggcggcgaagccgggcgatctcgataccgttgcgtgt
accgatcatcccgggccgcagatgatcgccgacgggtcgggcagcgtttatatcaacgat
caaccggccgcgcgggtcggcgacaagacgacctgcgacgggacgattgccgaaggctcg
gacaacgtcttcatcggtggcggcacacagcgggtacgggatgtgaagtcggccacgcgg
ctcgggtggctgggggcggcgctcggtatcgcgctcgcggtgtgcggccgcgggaagatg
agttggggcgactttctgaagagcaaggcgccgtgtatcgcgatgaatttcgcggcgggt
gcgttcggaacctggctgggcagtctggcgaggccctcggcggggcatccggtcaacgtc
attaccggcagcaaggtgctcgatggcacggacgataccgacttcgtcctgcccgggccg
ctgccgatcgtctggcagcgtttctatagcagcctcgatgatcgcgccgacagcctgttc
gggacggggtggagcgtgccgatcagcgtcgagttgcggctcgcgcgtgaacatggcgag
gttgcgtcgatcacgtactgggacgagcaggggcgcgatatcgtgttcccggccgtgccg
cccggcgagagccatttcagcgtaccggaaggcatttacctgatctgcaccgagggtggc
cactatgtggtcgagacggtcgacggtatgtatcgcgatttcggccgtgctcgtaccgac
gcggatagtgaagcgctcaagctctggcgtctcgaggatcgcaacggtaactggatcgag
gtcgagcgagaagcgcatgacgaggtcgtgcggcccgtaaggttgcacgatagcgccggt
cgcttgctgaccctgtcgtacgacaagttgcatccgcaacgtattggcgcgatcgaactg
acccgtggtgtcgatggcgaacaacccgacacgctggttcggtacgcgtacagcaacgcc
ggcgaactggtggccgttaccgatcgtagcggtcatatcgggcgacgcttcgcatacgag
cacgggctgatggtccagcacacgctgcgtggcggcctgcagtgtttctatgcgtggcag
ggtgtcggtcgcgatgcgcgtgtcgtgcgccattggaccgacgacggcgaagcgtacacg
ttcgacgcggatctcgcgcagcgtgcggtgacgattaccgaccagatcggtcgcgtgacg
cgctggacgtggaacgaggatcagcagccgacgagccatacggatgccgaaggccatgtg
tggcggttagagtggaacgcgaagcggcagttggtcagcacgaccgatccggccgggaac
acgacgcgcttcgaatatgacgagcgcgggcgtcagacgcagcgcatcgatgcgcttggg
caggtcgagcggaccgagtggaacgggtactacgacctgcccgtagcggaaaccgatccg
gcgaattcgcgctggatttaccgctacgacgatcgcggcaatctgacgatgacgcgcgat
ccggcgggttttgcgaccgagtatcaccgggacgagcgtgggctcgtgcatacgattcgc
gatgcgcggggtgggtacaagttcctcgagtggaatggtcgtgcgcagttgacgtcgtat
accgattgttccggcaaggttacgcgatttgcgtatgacgcacgtggtgcgctagcgcgt
gtgaccgatgcggccgggcagtcgaccgtgtacgaaacggatgcgatggggcgggtcacg
gggatcgggacggccgatggtgctcgtcagacgttccggtatgacgtggctgggcgtctc
gtcgaggttgtcgatgcgaatcagcgcagcacgcggtatgagatcaatccgcgcgggctg
ctgctttcgcgtaccgatgcggctaatcgcgtcgtgcgattcgggtacgacgatgcgttc
cggcttgcgagcctgaccaacgaaaaccgcgagtcgtatcgcttccagtatgaccgtcgc
gatttggcggctgcgcagatcgggctcgatggccacaagcgtacgtacgaatacgacgtg
tgcggccagggcacgatcgtgcgggatggaaagatcgagacgcgatacgagcgcgatgca
atcgggcgactgacggcgaagcaagccacgcatgagcgctgtgaatacctgtacgacaag
gcgagccgaatcgcgtcggccgagttgtacacgctggctgctcgtggtcctttgctgaag
aatcgggtcagcctgaagtacggggcgcgtggtgaggtgctcgaggaatacacgccgacg
ggctggcttgcgcatacctacgatgagctgggcaaccgcgtcagcaccacgatttcaggc
gagcgcacgatcgactggctgcattacgggtcgggccatgtgcaccagatccgcgttgac
ggtgctgcagtggcggacatcgagcgcgatgatctgcatcgggaagttctgcggacgcag
ggcaagctgacgagtcatttcgggtacgacgcggtgggccgtcgtgctcggcacgttgcg
cagcgaggcagggcggcggacgagctgctggcgaagcaatggcaatacgacgctgtggga
gatgtgatccagaagcgggatctgcgccatggcacgacgagctaccgatatgacccgacg
ggtcgcattgaacaggctgccgggccgggattgccgtcggaagtgtttcgctgggacgcg
gcagccaacctggtgtcgagcgatcacccgggaggcttcgttgagcacaaccggctcaag
gtgttcgaggacaagcgcttcgagtatgacgtttatggtcggctggttcgcaagttgagt
gggcacgggccggccaaagagctggtacttgagtacgacgattggaaccagttgaagacc
gtcgtggcgaaggaccggctgggtgtcgggacgacgcacttcgaatacgacgcgttcggt
cggcggattcggaagctcaacggggggtatgcgagtacggatttcctgtgggacggcatg
cggctcgtgcaggagacgtatcacgatcgtcagggcgaggaagagctgacgtacttgtat
gagtcgaatagctatgtgccgctggcgcggatcgaccagggcaagacggcggctaacgac
gacaatgcgcgggatgcagtctactatttccacaacgacgtgtcggggttgccggaggaa
ctgactaacgccgatggcgagttggtctggcaggctcgttacaaggtgtggggcaacgcg
gtgcaggaggagtgggttgcacgggcgccgcagcggccgacagcggtgtggggagaggtt
caagcgactgcgccagtgccgtctcgcgcaccgcgaccgcagaatctgcgctttcaaggg
cagtatctggaccgcgagaccgggctgcactacaacaccttccggttctacgacccggat
gtcggacgcttcatcaatccggatccgatcgggctgaacggaggccacaatctgtaccgc
tacacaccgaatccgatcacatggattgacccatggggatgggccggttgtaccctaacc
aaagccaaagcaaaggactatgactacactctgcgtttgaagcgatctgaatatccgcag
acattcggacacatctcggatgctatcgacaacgggcacgcggatatcgtgaccgtccag
agaggcagcgcaaagctcaatcgcaaggtcagtctggccggcgttaaaacgaaagctggc
atggatcgagatgagtggccgatggcgatgttcaaggaaggcggtaacggtgctagcgtg
agatatatcgacccgagtgacaaccggggagccggatcaagtatcggcaatgtgttgtcg
gatttgccagacggaacaagagttaaggtggaaatttacgatgagtga
DBGET
integrated database retrieval system
