Burkholderia contaminans: NL30_05675
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Entry
NL30_05675 CDS
T03969
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon00100
Steroid biosynthesis
bcon00909
Sesquiterpenoid and triterpenoid biosynthesis
bcon01100
Metabolic pathways
bcon01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
NL30_05675
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
NL30_05675
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bcon01006
]
NL30_05675
Enzymes [BR:
bcon01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
NL30_05675
Prenyltransferases [BR:
bcon01006
]
Terpene biosynthesis
Squalene/phytoene synthase
NL30_05675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AKM39413
LinkDB
All DBs
Position
1:complement(1311634..1312698)
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AA seq
354 aa
AA seq
DB search
MTTRTDSAFLLGDLLKNVSRSFYLTLRVLPDGMRDPVGLAYLLARAADTIADTALVAPDR
RAALLTDLRDEVERLGDGVALSRALEDVTRMQADSHEHVLLGSMEPMLALLRTQPEADRA
SIRKVVATLTAGMVFDLRTFPDEQSGRVVSLPTRGELDRYTYLVAGCVGEFWTDMTGMHT
PAARGWNLPGMCEKGIRFGKALQMTNILRDCGKDLRIGRCYLPDDVLGAHGLGVADLMAP
DASARARGVLVDLLRVTLDQYRDAGLYTLAIPRRFVRLRLACLWPIMIGLETLELLAGHA
AWLDPAKPAKVPRKRVYRIMASSLALVGSNAAIRARLTALADAVNAHLVQPATR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgactcgaaccgattccgctttcctgctcggcgacctgctgaagaacgtttcccgc
tccttctacctgacgctgcgcgtgctgcccgacggcatgcgcgacccggtcggcctcgcg
tacctgctcgcgcgcgcggccgacacgatcgccgacacggcgctcgtcgcaccggatcgc
cgggcggcgttgctgaccgacctgcgcgacgaggtcgagcggctcggcgacggcgttgcg
ctgtcgcgggcgctcgaggacgtgacgcggatgcaggccgattcgcacgagcacgtgctg
ctcggctcgatggagccgatgctcgcgctgctgcgcacgcagcctgaggccgaccgcgcg
tcgatccgcaaggtcgtcgcgacgctgacggcggggatggtgttcgacctgcgcacattt
cccgacgagcagtcggggcgcgtcgtgtcgttgccgacgcgcggcgagctcgaccgctac
acgtatctcgtggccggctgcgtgggcgagttctggaccgacatgacgggcatgcacacg
ccggccgcgcgcggctggaacctgccgggcatgtgcgagaagggcatccgtttcggcaag
gcgctgcagatgaccaacatcctgcgcgactgcgggaaggacctgcgcatcggccgctgc
tatctgccggacgacgtgctgggcgcgcacgggctcggcgtcgccgacctgatggcgccc
gatgcgtcggcgcgcgcgcgcggcgtgctcgtcgacctgctgcgcgtgacgctcgaccag
tatcgcgacgcgggcctgtatacgcttgcgatcccgcgccgcttcgtgcggctgcggctc
gcgtgcctgtggccgatcatgatcggcctcgaaacgctcgagctgctggccggccatgcg
gcgtggctcgatccggcgaagccggccaaggtgccgagaaagcgcgtctaccggatcatg
gcgtcgtcgctcgcgctggtcggttcgaacgccgcgattcgcgcgcgcctgaccgcgctc
gccgatgccgtgaacgcgcatctcgtgcagccggccacgcgctga
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