Burkholderia contaminans: NL30_06565
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Entry
NL30_06565 CDS
T03969
Name
(GenBank) ABC transporter
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
bcon
Burkholderia contaminans
Pathway
bcon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NL30_06565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcon02000
]
NL30_06565
Transporters [BR:
bcon02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NL30_06565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_33
AAA_29
AAA_16
AAA_21
nSTAND3
ABC_ATPase
AAA_25
nSTAND1
AAA_18
AAA_30
MMR_HSR1
AAA
DUF87
Cytidylate_kin
TsaE
AAA_7
Guanylate_kin
ATP-synt_ab
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AKM39585
LinkDB
All DBs
Position
1:complement(1524442..1527981)
Genome browser
AA seq
1179 aa
AA seq
DB search
MYFDRRLWAMMAGLRWRVAAAVALGLLAMGVGILRFVFLGRVLALVFSGAPARSIGEAVV
ATAACVLLRAWLDHRRTVLAQHTAGRVQATLRARLFDRIAALGPAWFSGERTGGVMLAVV
DGVEQLQTFFGTYLPQLVIAACAPVMIFAVLAWWDVPTAAILLVAALVTLALPQLVHRAD
KRAALARSAAFKAFGEEFLDAVQGLPTLKAFGQSRAFGAKLAAKARALSDSTFWVLALGL
LTRFFTDLGTGLGAAAAIAVGAWRVRHGDMSLEALLIVLMAGSEIFRPLRDLRSVLHQGM
IGQSAANAIHALLDADSHAPATDAPRVTGLRPEIAFDAVSFAYPGRRADAHAALSFSVRE
GETVAIVGPSGAGKSTIVRLLLRQHDAQGGAIRIGGHDVRTLDAGQVREMIAVVAQDATL
FDGSVADNLRLGRPDASDADMIAAARAANAHDFISALPDGYATRIGERGLMLSGGQRQRL
AIARALLRDAPILLLDEALSSVDAENEALIQQALDRLTRGRTTLVLAHRLSSVIGADRIL
VLDQGQVVDEGTHAALIARDGPYRRLMGPQLEAVAESVGAAATAGPTARASSGPQVRPLN
DDAAEIGWPETLQTLMRFVRPWTGKVVLTVLFGIGRVLAFIGVGVIGALVVGAVPGGHVS
PTLVTALLVIAPLAAVLHWLESWLAHDMAYRLLAEMRIALFATLERLAPAGLLRRRSGDL
VSLATQDVETVEYFYAHTLAPAFVAVLVPAAVLVLLASVAWPLALVLLPFLSWAGLAPVL
ARRDVDRLGTGAREALGQLGAHLTETIQGLAELTAFQAVARRRAAFVAEVDAYRKQRAKL
LDDLSAQSAALEIASGLGGLVVAALGALLCARGWFPRESLPLLVLVAVAAFMPVAEIGQV
ARQLADTIASTRRLRALEKEPVPVTDGTQAMPADPAVRFEATSFTYPGRSVPAIDRVSFV
VVPGSTVALVGASGAGKSTVASLLLRFWDPQQGRVTLGGVDLRDLRLDDLRQHIALVAQD
TYLFNDTLEANIRLAASDASDADVQRAIDHAALGDFVARLPDGLATRVGERGVQLSGGQR
QRVAIARAFLKDAPVLILDEATSHLDTISEQQIRAALEDLMTQRTSIIIAHRLSTVRNAD
LILVMEHGSVIEAGRHADLMARQGAYARLVSHQASGVAA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgaccgacgactatgggcaatgatggcgggactgcgctggcgggttgccgcg
gccgtcgcgctcggcctgctcgcgatgggtgtcgggattctgcgtttcgtatttctcggc
cgcgtgctggcgctggtcttttccggcgcgccggcacgcagcatcggcgaagccgtcgtt
gcaaccgccgcctgcgtactgctgcgcgcgtggctcgaccatcgccgtacggtgctcgca
cagcacacggccgggcgcgtgcaggccacgttgcgcgcgcggctgttcgaccggatcgcc
gcactcggccccgcgtggttcagcggcgaacgcacgggcggcgtgatgctggcggtcgtc
gatggcgtcgagcagctgcagacctttttcggcacctacctgccgcagctcgtgatcgcc
gcgtgcgcaccggtgatgatcttcgcggtgctcgcgtggtgggatgtgccgacggccgcg
atcctgctggtcgcggcgctcgtcacgctcgcgctgccgcaactcgtgcaccgcgccgac
aagcgtgcggcgctcgcgcgctcggccgcgttcaaggcattcggcgaggagtttctcgac
gcggtgcaaggcctgccgacgctgaaggcgttcgggcaaagcagggcattcggcgcgaag
ctggccgcgaaggcgcgcgcgctgtccgacagcacgttctgggtgctcgcgctcggcctg
ctcacgcggttcttcaccgatctcggcaccggcctcggcgcggccgccgcgatcgcggtc
ggcgcgtggcgcgtgcggcacggcgacatgagcctcgaggcgctgctgatcgtgctgatg
gccggcagcgaaatcttccggccgctgcgtgatctgcgttccgtgctgcaccaggggatg
atcggccagtcggcggcgaatgcgatccatgcgctgctcgatgcggatagtcatgcaccg
gccaccgacgcgccgcgtgtgacgggcctgcggccggagatcgcgttcgacgccgtcagc
ttcgcgtatccggggcgtcgcgcggacgcgcatgcggcgctgagcttttcggttcgcgag
ggcgagacggtggccatcgtcgggccgagcggtgcgggcaagtcgaccatcgtgcgcctg
ctgctgcgccagcacgatgcacagggcggcgcgatccgcatcggcggccacgacgtgcgc
acgctcgatgccggccaggtgcgcgagatgatcgcggtcgtcgcgcaggatgcgacgttg
ttcgacggcagcgtggccgacaacctgcggctcggccgccccgacgcgagcgatgcggac
atgatcgccgccgcgcgtgccgccaacgcgcacgatttcatttcggcgctgcccgacggc
tacgcgacgcgcatcggcgaacgcgggctcatgctgtcgggcggccagcgacagcgcctc
gcgattgcccgcgcgctgctgcgcgacgcgccgatcctgctgctcgacgaggcgctgtcg
tcggtcgatgcggagaacgaagcgctgatccagcaggcgctcgaccggctcacccgcggg
cggaccacgctcgtgctcgcgcaccggctgtccagcgtgatcggcgccgatcgcatcctg
gtgctcgaccaggggcaggtggtcgacgagggcacgcatgcggcgctgatcgcgcgcgac
ggtccgtatcgccggctgatggggccgcaactggaagcggtcgccgagtcggtcggtgcg
gcggcgacggccggcccgaccgcgcgcgcgtcgtcgggcccgcaggtgcggccgctgaac
gacgatgcggcggagatcggctggccggaaaccctgcagacgctaatgcgcttcgtgcgc
ccgtggacgggcaaggtcgtgctgacggtgctgttcgggatcggccgcgtgctcgcgttc
atcggcgtcggcgtgatcggcgcgctggtggtcggcgcggtgccgggcggccacgtgagc
ccgacgctcgtcaccgcgctgctcgtgatcgcgccgttggcggccgtgctgcactggctc
gaatcctggctcgcgcacgacatggcttaccggttgctcgcggaaatgcgcatcgcgctg
ttcgcgacgctcgaacgcctcgcgccggccgggctgctgcgccgccgctccggcgatctg
gtgtcgctcgcgacgcaggacgtcgagaccgtcgagtatttctatgcgcacacgctggcg
cccgcattcgtcgcggtgctcgtgccggccgccgtgctggtgctgctcgcgtcggtcgcc
tggccgctcgcgctcgtgctgttgccgttcctgtcgtgggccgggctcgcgccggtgctg
gcgcggcgtgacgtcgaccggctcggcaccggcgcacgcgaagcgctcggccagctcggc
gcgcacctgaccgaaacgatccaggggcttgcggagctgaccgcgttccaggccgtcgcg
cgccggcgcgcagcgttcgtggccgaagtcgatgcgtaccgcaagcaacgcgcgaagctg
ctcgacgatctgtcggcgcagagtgccgcgctggaaatcgcgagcgggctcggcgggctg
gtcgtcgcggcgctcggcgcgctgctgtgcgcacgcggctggtttccgcgcgagtcgttg
ccgctgctggtgctggtggccgtggccgctttcatgccggtggctgaaatcggccaggtc
gcgcgccagctcgccgatacgatcgcgtcgacgcgacgcttgcgtgcgctggagaaggag
ccggtgccggtgacggacggcacgcaggcgatgcctgccgatccggccgtgcgtttcgag
gccacgtccttcacgtacccgggccgcagcgtgcccgcgatcgaccgcgtgagcttcgtg
gtggtgcccggcagcacggtcgcgctggtcggtgcatcgggcgccggcaagtcgacggtc
gcgagcctgctgctgcgcttctgggatccgcagcagggccgcgtgacgctcggcggcgtc
gatctgcgcgacttgcggctcgacgacctgcggcagcacatcgcgctggttgcgcaggat
acctacctgttcaacgacacgctcgaagcgaacatccggctcgccgcgagcgatgcgtcc
gacgcggacgtgcagcgcgcgatcgaccatgcggcgctcggcgatttcgtcgcgcggctg
cctgatgggctggcgacgcgcgtcggcgagcgcggcgtgcaactgtcgggcggccagcgc
cagcgtgtcgcgattgcacgcgcgttcctcaaggatgcgccggtgctgatcctcgacgaa
gcgacgtcccatctggacacgatcagcgagcagcagatccgcgcggcgctggaagacctg
atgacgcagcgcacgtcgatcatcatcgcgcaccggctgtcgaccgtgcgcaatgccgac
ctgatcctcgtgatggagcacggcagcgtgatcgaggcggggcggcatgcggacctgatg
gcgcggcagggcgcgtatgcgcggctcgtgtcgcatcaggcgagcggggtggcggcgtaa
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