Burkholderia contaminans: NL30_08490
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Entry
NL30_08490 CDS
T03969
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03420
Nucleotide excision repair
bcon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NL30_08490
03430 Mismatch repair
NL30_08490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_08490
Enzymes [BR:
bcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NL30_08490
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NL30_08490
MMR (mismatch excision repair)
Other MMR factors
NL30_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKM39941
LinkDB
All DBs
Position
1:complement(1965634..1967997)
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDASDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGENAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLVAKMRADTQHMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPGLGTATD
DPAVDVLDPVSPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGGGSREQIVDPAVSA
PLPAFANKQRAADAGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcaggggcgggcagcggcaagacccgcgtgctgatcacccgc
atcgcgtggctgatccagcagggttatgcgtcgccgcccaccgtgctcgccgtgaccttc
acgaacaaggccgcgcgcgaaatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgcgacgccggcctgccgcagaccttccagatcctcgatacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgtcccgacaaggtcgacgcgtcc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gaaggcgtcgtcgatttccccgagctgctgctgcgctgctacgagctgctcgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcggcgagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggcgaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgcaccgatgcgggccacggcgagcccgtgcgcgtgtacgaagcg
agcaccgactcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaacacc
gggatggcgcgcagcgaagtggccgttctgtaccgcagcaacgcgcagtcgcgttcgatc
gagcacacgctgatgtcgtcgggcatcccgtatcgcgtgtatggcggcctgcgattcttc
gagcgccaggaagtgaagcatgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgtgcgcgtcgtgaacttcccgacccgcggcatcggcgcgcgctcgatc
gagcagctggccgacgccgcgcgcctgtacggctgctcgatggccgccgcgattccgtac
gtgacgggcaaggccggcacgagcctcggcgggttcgcgaacctggtcgcgaagatgcgc
gccgacacgcagcacatgaatctgcccgacaccgtcgagcacatcgtgcgcgccagcggc
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgtctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcatcgccgaggaaggctacgggctcgacacgccggcc
cgttcgatcccgctgcgcgcgggcgcgatcgcggcgcccgggctcggcactgcgacggac
gatcctgcggtcgacgtgctcgacccggtatcgcccgccgacccggcgcagaaccccgac
acgatgacgccgctcgccggcttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccgggcaggacgccgtgcaactgatgacggtgcacgcggcgaaggggctcgaa
ttctcggccgtgttcatcacgggcctcgaggaagggctgttcccgcacgagaacagcgtg
ctcgaatcggacggcctggaggaagagcgccggctgatgtacgtcgcgatcacgcgtgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacgcgctac
aacgtgcgttcgcgcttcttcgacgaactgcccgagcacgtgttgaagtggctgacgccg
aaggtcgaggccgggtcgcgctggggcggccggtcggacaacgccggctacggtcgcgac
tggttcgcgcggccgggcggcggaagtcgcgagcagatcgtcgacccggccgtatccgcg
ccgctgcccgcgttcgcgaacaagcagcgcgcggccgatgccggtttccgggtcggccag
caggtgttccacaccaagttcggcgaaggcacggtcaccgcgctcgaaggcaacggcacc
gatgcgaaggcgcaggtgaaattcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtggaatga
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