Burkholderia contaminans: NL30_12195
Help
Entry
NL30_12195 CDS
T03969
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03410
Base excision repair
bcon03430
Mismatch repair
bcon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NL30_12195
03430 Mismatch repair
NL30_12195
03440 Homologous recombination
NL30_12195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_12195
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NL30_12195
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NL30_12195
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NL30_12195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AKM40592
UniProt:
A0A0G3YT72
LinkDB
All DBs
Position
1:complement(2772013..2773710)
Genome browser
AA seq
565 aa
AA seq
DB search
MTRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADA
ASLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVTGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
CAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGVAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSIPGFHLRDALDLVSKREPDLI
VAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESAL
VAYRLVADTWNGVTRVQLIVEHAAG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatcgttacccgtcccgtcgcgcccgccgacgccgaagtgctcgcgcgccat
ggcctgcatcccgtccttgcacgcctgtacgcgtcgcgcggcgtgcagtcccccgccgac
atcgaaaccgcgctggcgcgactcgttccgcccaccgagctgaaaggctgcgccgacgcc
gcatcgctgctcgccgacgcgatcgccgacaagcggcgcctgctcgtggtcgccgattac
gactgcgacggggcaaccgcgtgcgcagtcgcggtgcgcggcctgcggatgttcggcgcg
cagatcgactacctggtgccgaaccgattcgaatacggctacggcctcacgcccgagatc
gtcgaactcgccgccgcgcgcaagcccgacctgctgatcaccgtcgataacggcatcgcg
agcgtgacgggcgtcgaagccgcgaatgcgcgcggcatcgacgtgctcgtgaccgatcac
cacctgcccggcgacgcgctgccggccgcgcgcgcgatcgtcaacccgaatcagcccggc
tgcgcgttcccgagcaagcacctcgccggcgtcggcgtgatgttctacgtgctgctcgca
ctgcgcgccgagctgcgtcgccgcggcgcgttcgcgagcaaggaagccgagccgcgtctc
gacggcctgctcgacctcgtcgcgctcggcaccgtcgccgacgtcgtgcggctcgacggc
aacaatcgcgtgctggttgcgcaggggctgcagcgcatccgcaacggccgcatgcagcca
ggcgtcgccgcgctgttccgggccgccgcgcgcgaagcgcgcacggcatcgggcttcgac
ctcggcttcggcctcggcccgcgcctgaacgccgccgggcggctgtccgacatgtcgctc
ggcatcgagtgcctgatcaccgacgatatcggccgcgcatgggatctcgcgcagcagctc
gacgtgatgaaccgggaacgccgcgaaatcgaagccggcatgcagcagcaggcgctcgcc
gatctcgccgacgtcgatccggccgacgcgtgcacgatcaccctcttcaaccccgagtgg
catcagggcgtgatcggcatcgtcgccggccggctcaaggaaaaattccaccgcccgtcg
ttcacgtttgcgcatgcggacgacgaaggcaagcgggtcaagggttcgggccgctcgatt
ccaggcttccacctgcgcgacgcgctcgacctcgtgtcgaaacgcgaaccggacctgatc
gtcgcgttcggcggccacgcgatggcggccggcctcacgctcgacaccgagaacgtgccc
cgcttcgcggccgcgttcgaggccgtcgcgcgcgaatggctgtccgacgacgcgctcgcc
cgcgtgatcgaaaccgacggcgaactcgaagacgcgtacttcacgccgcagttcgtcggg
ctgctcgacgaggccgtctgggggcaaggttttccggccccgcttttctcgggcgaattc
gacgtcgtgtcgcagtcgctcgtgaaggaaaagcatctgaaactgcagctggcgcgcggc
cggcaacgcttcaacgcgatctggttcaaccacacggagccgctgccggagagcgcactg
gtcgcctaccgcctcgtcgccgacacgtggaacggcgtcacgcgcgtccagctgatcgtc
gaacacgcggccggctga
DBGET
integrated database retrieval system