KEGG   Burkholderia contaminans: NL30_12195
Entry
NL30_12195        CDS       T03969                                 
Name
(GenBank) single-stranded DNA exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcon  Burkholderia contaminans
Pathway
bcon03410  Base excision repair
bcon03430  Mismatch repair
bcon03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NL30_12195
   03430 Mismatch repair
    NL30_12195
   03440 Homologous recombination
    NL30_12195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcon03400]
    NL30_12195
DNA repair and recombination proteins [BR:bcon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     NL30_12195
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     NL30_12195
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      NL30_12195
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 Glyco_transf_4 HTH_3
Other DBs
NCBI-ProteinID: AKM40592
UniProt: A0A0G3YT72
LinkDB
Position
1:complement(2772013..2773710)
AA seq 565 aa
MTRIVTRPVAPADAEVLARHGLHPVLARLYASRGVQSPADIETALARLVPPTELKGCADA
ASLLADAIADKRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVTGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
CAFPSKHLAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGVAALFRAAAREARTASGFDLGFGLGPRLNAAGRLSDMSL
GIECLITDDIGRAWDLAQQLDVMNRERREIEAGMQQQALADLADVDPADACTITLFNPEW
HQGVIGIVAGRLKEKFHRPSFTFAHADDEGKRVKGSGRSIPGFHLRDALDLVSKREPDLI
VAFGGHAMAAGLTLDTENVPRFAAAFEAVAREWLSDDALARVIETDGELEDAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTEPLPESAL
VAYRLVADTWNGVTRVQLIVEHAAG
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacccggatcgttacccgtcccgtcgcgcccgccgacgccgaagtgctcgcgcgccat
ggcctgcatcccgtccttgcacgcctgtacgcgtcgcgcggcgtgcagtcccccgccgac
atcgaaaccgcgctggcgcgactcgttccgcccaccgagctgaaaggctgcgccgacgcc
gcatcgctgctcgccgacgcgatcgccgacaagcggcgcctgctcgtggtcgccgattac
gactgcgacggggcaaccgcgtgcgcagtcgcggtgcgcggcctgcggatgttcggcgcg
cagatcgactacctggtgccgaaccgattcgaatacggctacggcctcacgcccgagatc
gtcgaactcgccgccgcgcgcaagcccgacctgctgatcaccgtcgataacggcatcgcg
agcgtgacgggcgtcgaagccgcgaatgcgcgcggcatcgacgtgctcgtgaccgatcac
cacctgcccggcgacgcgctgccggccgcgcgcgcgatcgtcaacccgaatcagcccggc
tgcgcgttcccgagcaagcacctcgccggcgtcggcgtgatgttctacgtgctgctcgca
ctgcgcgccgagctgcgtcgccgcggcgcgttcgcgagcaaggaagccgagccgcgtctc
gacggcctgctcgacctcgtcgcgctcggcaccgtcgccgacgtcgtgcggctcgacggc
aacaatcgcgtgctggttgcgcaggggctgcagcgcatccgcaacggccgcatgcagcca
ggcgtcgccgcgctgttccgggccgccgcgcgcgaagcgcgcacggcatcgggcttcgac
ctcggcttcggcctcggcccgcgcctgaacgccgccgggcggctgtccgacatgtcgctc
ggcatcgagtgcctgatcaccgacgatatcggccgcgcatgggatctcgcgcagcagctc
gacgtgatgaaccgggaacgccgcgaaatcgaagccggcatgcagcagcaggcgctcgcc
gatctcgccgacgtcgatccggccgacgcgtgcacgatcaccctcttcaaccccgagtgg
catcagggcgtgatcggcatcgtcgccggccggctcaaggaaaaattccaccgcccgtcg
ttcacgtttgcgcatgcggacgacgaaggcaagcgggtcaagggttcgggccgctcgatt
ccaggcttccacctgcgcgacgcgctcgacctcgtgtcgaaacgcgaaccggacctgatc
gtcgcgttcggcggccacgcgatggcggccggcctcacgctcgacaccgagaacgtgccc
cgcttcgcggccgcgttcgaggccgtcgcgcgcgaatggctgtccgacgacgcgctcgcc
cgcgtgatcgaaaccgacggcgaactcgaagacgcgtacttcacgccgcagttcgtcggg
ctgctcgacgaggccgtctgggggcaaggttttccggccccgcttttctcgggcgaattc
gacgtcgtgtcgcagtcgctcgtgaaggaaaagcatctgaaactgcagctggcgcgcggc
cggcaacgcttcaacgcgatctggttcaaccacacggagccgctgccggagagcgcactg
gtcgcctaccgcctcgtcgccgacacgtggaacggcgtcacgcgcgtccagctgatcgtc
gaacacgcggccggctga

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