Burkholderia contaminans: NL30_12870
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Entry
NL30_12870 CDS
T03969
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03030
DNA replication
bcon03430
Mismatch repair
bcon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NL30_12870
03430 Mismatch repair
NL30_12870
03440 Homologous recombination
NL30_12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcon03032
]
NL30_12870
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_12870
Enzymes [BR:
bcon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NL30_12870
DNA replication proteins [BR:
bcon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NL30_12870
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NL30_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AKM40713
LinkDB
All DBs
Position
1:complement(2919033..2919650)
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AA seq
205 aa
AA seq
DB search
MQTVAVLDFETTGLSPNMGDRATEIAVILLRDGEIVDRFQSLMNAGRRIPSDVVALTGIT
NEMIAAAPPASKVMKEAAAFVGKHAVVAHNAGFDKRFWQSELGLLGESAEHAFACTMLVA
RRIYPDARSHRLSSLVDMLRLPKSGRAHRAMVDAEMAGHLWCRLQDDIARTYGLNRIDHA
LMARVQATAKAKVPTYLRSLVGAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgttgcggtactggacttcgaaacaaccggactttcgccgaatatgggcgac
cgtgcgaccgaaatcgccgtcatcctgctccgggacggtgaaatcgtcgaccgtttccag
agcctgatgaatgcaggcagacgcataccgtccgatgtcgtcgcgctgaccggcatcacg
aacgagatgatcgcagcggcgccgccggcgtcgaaggtcatgaaggaagccgcggcgttc
gtcggcaagcatgcggtcgtggcccacaacgccggtttcgacaaacggttctggcagtcg
gaactcgggctgcttggcgagtcggccgagcatgcgtttgcgtgcacgatgctcgtggcg
agacgtatctatccggatgcccggagtcaccgcctgtcgagcctggtcgatatgctgcgg
ctgccgaaatcgggccgtgcgcaccgggcgatggtcgatgccgagatggccgggcacctg
tggtgccggctgcaggacgacattgcgcgaacttatggactgaatcgcatcgatcacgca
ctcatggcgcgtgtacaggccacggcgaaggcgaaggtgccgacctacctgcgttcgctc
gtgggcgcacacgcgtga
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