Burkholderia contaminans: NL30_13685
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Entry
NL30_13685 CDS
T03969
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcon
Burkholderia contaminans
Pathway
bcon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NL30_13685 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcon03021
]
NL30_13685 (rho)
03019 Messenger RNA biogenesis [BR:
bcon03019
]
NL30_13685 (rho)
Transcription machinery [BR:
bcon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NL30_13685 (rho)
Messenger RNA biogenesis [BR:
bcon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NL30_13685 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKM40863
UniProt:
A0A0G3YTZ8
LinkDB
All DBs
Position
1:complement(3087068..3088330)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagctgatgttcgccattctcaaa
aagcgcgccaagacgggtgagacgatcttcggcgacggtacgctcgaagtgctgccggac
ggcttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgaacgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtcgggcaagacagtgatgctccagcacatcgcacatgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgaacgccctgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcctcgacgttcgacgaaccggccacgcgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgattctgctcgattcgatcacgcgtctcgcacgcgcgtacaacaccgtgatcccggca
tcgggcaaggtgctgacgggtggtgtcgacgcgaacgcactgcaacgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtcatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtgtatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaaatgctgatcaagcccgagattcttcaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaagcgatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcgga
taa
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