Burkholderia contaminans: NL30_19520
Help
Entry
NL30_19520 CDS
T03969
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NL30_19520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcon03019
]
NL30_19520
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_19520
Enzymes [BR:
bcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NL30_19520
Messenger RNA biogenesis [BR:
bcon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NL30_19520
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NL30_19520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKM42113
UniProt:
A0A0G3YXK9
LinkDB
All DBs
Position
2:877596..879443
Genome browser
AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQ
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTQSGAEAAATERALREGEIDLLYVAPER
LMTGRFLDLLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFISSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEESKPCGNCDTCLEPPDSWDATREAQMA
LSCVFRAQRASGFNFGSSHLIEILRGGRTEKVLQRGHDQLSTFGIGAALSEPEWRAIFRQ
LVAYGYLAVDHGGFGALMLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGTRERARWDALRAWRAETAKTDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaatcctcgacgaagtatttggttatcccgcatttcgcggccag
cagggcgagatcgtcgaacacgtcgccggcggcggcgattgcctcgtgctgatgccaacc
ggcggcggcaagtcgctgtgctatcagattcccgcgctgctgcgccgcgaggccgggcag
ggcgccggcatcgtcgtgtcgccgttgatcgcgctgatgcaggaccaggtcgccgcactg
agcgaagtgggtgtgcgcgccgcgtacctgaattcgacgcagtcgggcgccgaggctgcg
gcgaccgagcgcgcgttgcgcgaaggcgagatcgatctgctctacgtcgcgccggagcgg
ctgatgacggggcgcttcctcgacctgctcgagcgcgcgaagatcggcctgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggagtacattcagctg
tcggtgctgcacgagcggttcccgtcggtgccgcgcattgcgctgaccgccacggccgat
gcgattacgcgcgacgagatcatccaccgtctcgcgctcgacgatgcacgcgtgttcata
tcgagcttcgaccgcccgaacatccgctaccggatcgtcgaaaaggacaacgcgcgttcg
caactgctcgatttcatccgcgccgaacacacgaatgccgacggtacgacggatgcaggc
gtcgtctattgcctgtcacgccgcaaggtcgaggaaacggccgaatggctgaaggcgcag
ggcgtgcgtgcgttgccgtatcacgcggggatggagttcgaggtgcgacagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagccggacgtgcgcttcgttgcgcacctggatctgccgaaaagcgtcgaaggc
tactaccaggaaaccggtcgcgccggccgcgacgggatgcccgcgaatgcatggatggcg
tatggtctcggcgacgtcgttcagcagcgcaagatgatcgacgagtccgatgcggacgac
gcacacaagcgcgtccagacgtcgaagctcgacgcgctgctcgggctgtgcgagacgatc
tcgtgccgccgcgtgcggctgctgaactacttcggcgaggagagcaagccgtgcggcaac
tgcgacacgtgccttgagccgcccgattcatgggacgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggctcgagccacctg
atcgagatcctgcgcggcgggcgcaccgagaaggtgttgcagcgcggccacgaccagctc
agcacgttcggaatcggcgcggcgctgtccgagccggagtggcgtgcgattttccggcag
ctcgtcgcgtacggctacctggccgtcgaccatggcggcttcggcgcactgatgctgacc
gaggccgcgaagcccgtgctgaagaacgaggagaaggtcacgctgcgccgctacgtgaag
ccgcagcgcacgcgccagtcgtcgagccgcagcggtacgcgcgtcgatccgacggccggc
atgggcacgcgtgagcgcgcacggtgggatgcgctgcgtgcgtggcgtgcggaaaccgcg
aaaacggacggcgtgcccgcctatgtgatcttccacgacgcgacgcttgccgagatcgca
cgcaacgcgccggagacgatcgacgacctgcgccatatccccggcatgggcgtgcgcaag
ctcgagcgcttcggcgacgagatcatcgacgtcgtcgagtcggcctga
DBGET
integrated database retrieval system
