Burkholderia contaminans: NL30_21035
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Entry
NL30_21035 CDS
T03969
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bcon
Burkholderia contaminans
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcon03016
]
NL30_21035
Enzymes [BR:
bcon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NL30_21035
Transfer RNA biogenesis [BR:
bcon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NL30_21035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AKM42397
LinkDB
All DBs
Position
2:complement(1200299..1202386)
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AA seq
695 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAASELMQEADTA
AQQIDLDFLWECAPADEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQVQYEEELKAGKLPEAFAGKVLGLLTRPDKNAIEYKA
MEAAAAARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPAVTVGALPDDLPRAD
VQAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIVRGDPVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQEIVANETRAELVFVKSNLRHNH
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
DGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKHVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAAEEEDDAEGGEDTLIDADDA
TAETEAEALAEADGAAAGEGGEAANGNAGDEGRAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgggccaaggtgcgcgcgaaagac
gtgctgatcgaattcgacaagccggccgcaagcgaactgatgcaggaggccgacacggcc
gcgcagcagatcgatctggatttcctgtgggaatgcgcgccggccgacgagttcgcgtat
acggcgctggccgcggaatacttcggcgcgacgtacggcccggtcgagcgcgcggcgctg
gtgttgcgactgcacggctcgcccgtctacttccgccgcaaggggcgcggccagtaccag
cgcgcgccggaagagcagctgaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtccaggtgcagtatgaagaggaactgaaggccggcaagctgccggaggcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaacgcgatcgaatacaaggca
atggaagcggcggctgctgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggtattgcgtcgccgcgcgcgctgcacgaggcgcgcttcctcgcggaattcttcccgcac
ggcacgggcttcccggccgtcacggtcggcgcgctgccggacgacctgccgcgcgcggac
gtccaggcgttctctatcgacgacatcacgacgaccgaaatcgacgatgcgttctcggtc
gagcacctggccgacggccgcgtgcggatcggcgtgcacattgccgcaccggcgctcggc
atcgtgcgcggcgacccggtcgacgcgatcgcgcgcacgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaagag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaaccgcgaaacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtgttcgtgaagagcaacctgcgacacaaccac
ctcgacgaactcgtcaacgaagagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtcgcg
cgtgcgggctatggcctgaagcgcgaggtgcagcgcaacaccgactacaacttctacgtc
gacggcgagcacgtgtcgatcacgccgcgccgtcgcgggtcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
ccgggcatctaccgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcatgaaggcctcggcgtggcgcagtacgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaatcagtggcaactgctcgcgtgcgtgcagcat
ggcgttaccgcgaagctcgccgcgccgttcaagccgaaggacgccgatctgtacgcagtc
gtgcagggcttcgacgacacctacacggcctacgcggactaccagcgccggatggaatat
ttctggtgtctgcgctggctcgcgcaggagcagaagaagcacgtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagttgacgatc
gaggcgtcggtgcggttgctgaacgtgctcgacgcaccgaccgtgacgagcggcgacgcg
gccgaggaagaggatgacgccgaaggcggcgaagacacgctgatcgacgccgacgacgcg
acggccgaaaccgaagccgaagcactggcggaagcggatggcgcagcagctggcgaaggc
ggcgaagccgcaaacggcaacgccggcgacgaggggcgcgcatcatga
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