Burkholderia contaminans: NL30_24525
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Entry
NL30_24525 CDS
T03969
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bcon
Burkholderia contaminans
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcon03009
]
NL30_24525
Enzymes [BR:
bcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NL30_24525
Ribosome biogenesis [BR:
bcon03009
]
Prokaryotic type
rRNA helicases
NL30_24525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
AKM42994
UniProt:
A0A0G3YY33
LinkDB
All DBs
Position
2:1995058..1996455
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AA seq
465 aa
AA seq
DB search
MTQPTATPFSALSLTPATLANLAQLGYVDMTPIQAASLPVALAGQDLIAQAKTGSGKTAA
FSLALLARLDARRFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARMCPT
TRQTLLFSATYPDGIAKLSQQFLRNPKEIKLEERHDNSKIRQRFYEVTEDERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELDQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGAI
EQAQKRDVEWHPLAELTPADDGVLTPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVALERGVARDALRKLNAGKIKGKRVKVRLMDEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccgaccgccacgccgttcagcgcgctgtcgttgacgccggccacgctagcc
aacctcgcgcagctcggctatgtcgacatgacgccgatccaggccgcgagcctgccggtc
gcgctggccggtcaggacctgatcgcccaggcgaagacgggcagcggcaagaccgccgcg
ttctcgctcgcgctgctggcgcgcctcgatgcgcgccgcttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgaactcgccgaccaggtcgcgcaggaagtgcgccgcctcgcgcgc
gccgaggagaacgtgaaagtgctgacgctgtgcggcggcacgccgatgcgcccgcaggcg
cagagcctcgagcacggcgcgcacatcgtcgtcggcacgccgggccgcatcatggatcac
ctcgatcgcggcaacctgaagctcgacgcactgaacacgctggtgctcgacgaagccgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcacggatgtgcccgacc
acgcgccagacgctgctgttctccgcgacctatccggacggcatcgcgaagctgagccag
cagttcctgcgcaacccgaaggaaatcaagctcgaagagcgccacgacaacagcaagatc
cgccagcgcttctatgaagtgacggaagacgagcggctgcacgcggtgggccagttgctg
aaccactaccggccggtgagcacgatcgcgttctgcaacacgaagcagcagtgccgcgac
ctgctcgacgtgctgcacgcgcagggcttccacgcgctcgcgctgcacggcgagctcgac
cagcgcgagcgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtg
gccaccgacgtcgccgcgcgcgggctcgacatcgcgcagctcgaggcggtgatcaacgtc
gacgtgacgcccgaccccgaagtgcacgtgcaccgcatcggccgcacgggccgcgcggat
caggacggctgggcgctgagcctcgcgagcatggacgagatgggccgcgtgggcgcgatc
gaacaggcgcagaagcgcgacgtcgaatggcatccgctcgcggaactgacgccggccgac
gacggcgtgctgacgccgccgatggaaacgctgcagatcctcggcgggcgcaaggacaag
atccgcccgggcgacgtgctcggcgcgctgaccggcgacgccgggttcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgctcgagcgcggcgtggcg
cgcgacgcgctgcgcaagctcaatgcggggaagatcaagggcaagcgggtcaaggtccgg
ttgatggacgaagagtaa
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