Burkholderia contaminans: NL30_27080
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Entry
NL30_27080 CDS
T03969
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NL30_27080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_27080
Enzymes [BR:
bcon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NL30_27080
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NL30_27080
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NL30_27080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Motif
Other DBs
NCBI-ProteinID:
AKM43458
UniProt:
A0A0G3Z192
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All DBs
Position
2:complement(2548366..2549193)
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AA seq
275 aa
AA seq
DB search
MPELPEVEVTRRGIAPFVAGRRVERVDVRTEMLRWPVPAGLAEQLRAREVLAVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASE
SLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGQPCRVCNTPIRQIVQGQRSTYFCPTCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagtcgaagtcacgcgccggggcatcgcgccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgtaccgagatgctgcgctggcccgtgccggccggg
ctcgccgagcagttgcgcgcgcgcgaggtgctcgccgtcgagcgtcgcggcaagtacctg
ctgttcgaggtcgacgcgggctggttcatcgtccacctcggcatgacgggcacgctgcgc
gtgctgcccgcggctggcgtgccggtcgccgcgaagcatgaccacatcgactggatcttc
gacgaattcgtgctgcggttccgcgatccgcgccgcttcggcgcggtgctgtggcacccg
cgcgaagcgggcgacgtgcatgcgcatccgctcctcgcgagcctcggggtcgagccattc
tcgccggcgtttaccggcgcgctgctgcacgcgcgcacgcgcggccggaccgtgtcggtc
aagcaggcgctgctcgcgggcgacatggtcgtcggcgtcggcaacatctatgcgtcggag
agcctgtttcgcgccggcatccggccgacgacggccgccggcaaggtatcgctgccgcgc
tacgagcggctggccgacgcagtgcgcgccacgcttgccgacgcgatcgagcgcggcggc
agcacattgcgcgatttcgtcggcagcaacggcgaaagcggctatttccagctcgactgc
ttcgtctacgaccgcgcgggccagccgtgccgcgtgtgcaacacgccgatccgccagatc
gtgcagggtcagcggtcgacctatttctgcccgacctgccagcgttga
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