Burkholderia contaminans: NL30_28255
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Entry
NL30_28255 CDS
T03969
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bcon
Burkholderia contaminans
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcon01011
]
NL30_28255
Enzymes [BR:
bcon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NL30_28255
Peptidoglycan biosynthesis and degradation proteins [BR:
bcon01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NL30_28255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AKM43672
LinkDB
All DBs
Position
2:complement(2801664..2803616)
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AA seq
650 aa
AA seq
DB search
MSNSLFRVYRAVALALSATALVAGTAACAAPNDDTVSGDDQTFVQLREAARRNDAAKAAQ
LASMIPNYPVPSYVEYFQIKPQLFDSTGRARVDAPDAPVQSFLQRYDGQAIADRLRNDYL
LVLGARHDWRNFDEQYKRFVLDDDTQVKCYALESRAARGENVAEAARALLVEPKNYGDAC
VDLITALTVNQQFTSDDVWQQARLAYEQNYTTLGGKIVDALGPRPVGFDQATSAPPLYLA
RGVGPDATSHQIALIALSRMARNDPDAAAGMLTTVAPSLTKQEQAIAWGAIGYQGAIKRS
PLASVWYAKSTNAPLSNPGYEWRTRAALLAGNWPMVRWSIEQMPPSLRNDPAWIYWHARA
LKQSGDTLQANQEFEQVAGQFNFYGQLAGEELGQRTTIPPRTKVSDAEIDAMSKIPGFAL
AQRFYALNLRLEGNREWNWPLRGMTDRQLLAAAEYGKRVELLDRTVNTADRTKAEHDFTL
RYPSPYRNIVERYAQSTGLDIEWAYGLIRQESRFIISARSSVGAGGLMQLMPATAQMVAK
KLGMGTISRAQMHDIDTNIQLGTWYLADIYNNFDSSPVLATAGYNAGPGRPRQWRQVLTQ
PVEGAIFAETIPFNETRDYVKNVLSNTVYYAALFEGKPQSLKKRLGMISP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagccttttccgagtatatcgcgcggtcgcgctggcgctttcggccaccgcg
ctcgtcgcgggcacggccgcgtgcgccgcaccgaacgacgatacggtctccggggacgac
cagaccttcgtgcagcttcgagaagccgcacgccgcaacgacgccgcgaaagccgcgcag
ctcgcgtcgatgatcccgaactatccggtaccgtcctacgtcgagtatttccagatcaag
ccgcagttgttcgattcgacgggccgcgcgcgcgtggacgcgccggacgcgcccgtgcag
tcgttcctgcagcgctacgacggccaggcgatcgccgatcgcctgcgcaacgactacctg
ctcgtgctcggcgcgcgccacgactggcgcaacttcgacgagcaatacaagcgcttcgtg
ctcgacgacgacacgcaggtcaagtgctatgcgctggaatcgcgcgcggcgcgcggcgag
aacgtcgccgaagcggcacgtgcgctgctcgtcgagccgaagaactacggtgacgcgtgc
gtcgacctgatcaccgcgctcacggtcaaccagcagttcacgagcgacgacgtgtggcag
caggcgcgcctcgcgtacgagcagaactacacgacgctcggcggcaagatcgtcgatgcg
ctcggcccgcgcccggtcggcttcgaccaggcgacgagcgcgccgccgctgtacctcgcg
cgcggcgtcggccccgacgcaacctcgcaccagatcgccctgatcgcgctcagccgcatg
gcgcgcaacgatccggacgcagccgccggaatgctgaccacggtcgccccgtcgctgacc
aagcaggagcaggcgatcgcgtggggcgcgatcggctaccagggcgcgatcaagcgctcg
ccgctcgcatcggtctggtatgcgaaatcgacgaatgcgccgctgtcgaacccgggctac
gaatggcgcacgcgcgccgcgctgctcgccggcaactggccgatggtgcgctggtcgatc
gagcagatgccgccgtcgctgcgcaacgatccggcctggatctactggcatgcgcgcgcg
ctcaagcagagcggcgacacgctgcaggcgaaccaggaattcgagcaggtcgcgggccag
ttcaacttctacgggcagctcgccggcgaagagctcggccagcgcacgacgatcccgccg
cgcacgaaggtgagcgatgccgagatcgatgcgatgagcaagattccgggcttcgcgctc
gcgcagcgtttctacgcgctgaacctgcgcctcgaaggcaaccgcgaatggaactggccg
ctgcgcgggatgaccgatcgccagctgctggccgcggccgaatacggcaagcgcgtcgag
ctgctcgaccgcacggtcaacacggccgaccgcacgaaggccgagcacgacttcacgctg
cgctacccgtcgccgtaccgcaacatcgtcgagcgctatgcgcaatcgacgggcctcgac
atcgagtgggcgtacgggctgatccgccaggaatcgcgcttcatcatcagcgcgcgttcg
tcggtgggcgcgggcggcctgatgcagctgatgccggccaccgcgcagatggtcgcgaag
aagctcggcatgggcacgatctcgcgcgcgcagatgcacgacatcgataccaacatccag
ctcggcacgtggtatctggcggacatctacaacaacttcgacagctcgccggtgctcgcc
acggccggctacaacgcgggcccgggccggccgcgccagtggcgccaggtgttgacgcag
ccggtcgaaggcgcgatcttcgcggaaacgattccgttcaacgagacgcgcgactacgtg
aagaacgtgctgtcgaacaccgtctattacgcggcgctcttcgagggcaagccgcagtcg
ttgaagaaacgtctaggcatgatctcgccctga
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