Burkholderia contaminans: NL30_34900
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Entry
NL30_34900 CDS
T03969
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcon
Burkholderia contaminans
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcon03032
]
NL30_34900
03400 DNA repair and recombination proteins [BR:
bcon03400
]
NL30_34900
Enzymes [BR:
bcon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NL30_34900
DNA replication proteins [BR:
bcon03032
]
Prokaryotic type
DNA Topoisomerases
NL30_34900
DNA repair and recombination proteins [BR:
bcon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NL30_34900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKM45071
LinkDB
All DBs
Position
3:complement(956981..958009)
Genome browser
AA seq
342 aa
AA seq
DB search
MKQRAPRTGATLRHVDDRHPGYTRRRLRNGFAYYRQDGARIRDAAEIARIDALAIPPAYT
DVWICADPLGHLQATGRDARGRKQYRYHPQWRATRDANKYARMAAFARALPRIRARVAHD
LALPGMPRDKVVATIVRLLDTTLARVGNAEYARDNGSYGLTTLRKRHLTLEPGQVRLRFA
GKSGIEHDVTVDDARVARIVRRCAELHGHELFQYVDDDGMRHAVGSSDVNDYLRAASGTD
FTAKDYRTWAGSVHALALLRRAPHRGVTHARKQIVETVREVADLLRNTPAVCRRCYIHPD
VLDAFESGALATLAVSRTPRGLRVDEAAFAALLGCAGRRTGK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcgcgccccccgcacgggcgcgacgctacgtcatgtcgacgaccgacacccc
ggctacacgcgccgccgcctgcgcaacggcttcgcgtactaccggcaggacggcgccagg
attcgggatgccgcggaaatcgcccgcatcgacgccctcgcgatcccgcccgcctatacc
gacgtgtggatctgcgcggatccgctcggacatcttcaggcgacgggccgcgacgcgcgc
ggccgcaagcagtatcgctatcacccgcaatggcgggcgacgcgcgacgcgaacaaatac
gcgcggatggcggcattcgcacgtgcgctgccgcgtatccgcgcacgcgtcgcgcacgat
ctcgcgttgccgggcatgccacgcgacaaggtcgtcgcgacaatcgtccggttgctcgac
acgacgctcgcgcgggtcggcaatgcggaatacgcgcgcgacaacgggtcgtacggattg
acgacgctgcgcaagcgccatctgacgctcgaacccggccaggtacgcctgcgcttcgcc
ggcaagagcggcatcgagcatgacgtgacggtcgacgatgcgcgtgtcgcgcggatcgta
cggcgctgcgccgaactgcacgggcacgagctgttccagtatgtcgacgatgacggcatg
cgccacgcagtcggctcgtccgacgtgaacgactacctgcgcgcggcgagcggcaccgat
ttcaccgcgaaggattaccggacttgggccggcagcgtgcacgcgctcgcgttgttacgg
cgcgcgccgcatcgcggcgtgacgcacgcgcgcaagcagatcgtcgagaccgtgcgggag
gtggccgacctgctgcgcaacacgccggccgtgtgccggcgctgctacatccatcccgac
gtgctcgatgcattcgagtcgggtgcgctggctacgctcgcggtgtcgcgcacgccgcgt
gggctgcgcgtggacgaagcggcgttcgcggcgttgctcggctgcgcaggtcggcgcact
gggaaatga
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