Burkholderia contaminans: NL30_35845
Help
Entry
NL30_35845 CDS
T03969
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcon
Burkholderia contaminans
Pathway
bcon00260
Glycine, serine and threonine metabolism
bcon00460
Cyanoamino acid metabolism
bcon00630
Glyoxylate and dicarboxylate metabolism
bcon00670
One carbon pool by folate
bcon00680
Methane metabolism
bcon01100
Metabolic pathways
bcon01110
Biosynthesis of secondary metabolites
bcon01120
Microbial metabolism in diverse environments
bcon01200
Carbon metabolism
bcon01230
Biosynthesis of amino acids
bcon01240
Biosynthesis of cofactors
bcon04981
Folate transport and metabolism
Module
bcon_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NL30_35845 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NL30_35845 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NL30_35845 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NL30_35845 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NL30_35845 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NL30_35845 (glyA)
Enzymes [BR:
bcon01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NL30_35845 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AKM45237
LinkDB
All DBs
Position
3:1176098..1177393
Genome browser
AA seq
431 aa
AA seq
DB search
MNENARFFAETLQSRDPVIASEIALELRRQQTQIELIASENIASAAVLEAQGTVLTNKYA
EGYPSRRYYGGCDHVDRIEALAIDRACALFDASHANVQPHSGAQANGAVMLALVKPGDTV
MGMSLDAGGHLTHGARPALSGKWFNAVQYGVSPDTLRIDYDDVRRLAQRHRPKLIIAGYS
AYPRALDFAAFREIADSVDAKLMVDMAHIAGIVAAGRHPNPVPFADVVTSTTHKTLRGPR
GGFILTNHADVAKQINSAVFPGLQGGPLMHVVAGKAVAFAEALRPEFTRYIDQMLRNAQA
LAQVLTAGGLTLVTGGTDNHLLLVDLRARRITGMQAEKALERAGITCNKNGIPFDTENPT
VTSGIRLGTPAGTTRGFGTAQFEQIGDMILAVLAALARNPDGDGGVERAVRTRVRDLCAQ
FPIYAHAEAFA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagaacgcccgcttttttgccgaaacgctccagagccgcgatccggtgatcgca
tctgaaatcgcgttggagttgcgtcgccagcagacgcagatcgaactgattgcatccgaa
aacatcgcgtccgcggcggtgctggaagcgcagggcaccgtgttgacgaacaaatacgcg
gaaggctatccgtcgcgccggtactacggcggttgcgaccatgtcgaccggatcgaggca
ctcgcgatcgaccgcgcgtgcgcgctgttcgacgcgagccacgcgaacgtgcaaccgcac
tcgggcgcgcaggccaacggcgcggtgatgctcgcgctcgtcaagccgggcgacacggtg
atggggatgtcgctcgatgcgggcggccacctgacgcatggcgcacgccccgcgctgtcg
ggaaagtggttcaacgcggtgcagtacggcgtgagccctgacacgctgcgcatcgattac
gacgacgtgcgccggctcgcgcagcgccatcggccgaagctgatcatcgcgggctattcc
gcgtatccgcgcgcgctcgacttcgccgcgttccgcgagatcgcggacagcgtcgacgcg
aagctgatggtcgacatggcacatatcgccggcatcgtcgcggccggccgccacccgaac
ccggtgccgttcgccgacgtcgtgacgtcgaccacgcacaagacgctgcgcggcccgcgc
ggcggtttcatcctgacgaaccacgccgacgtcgcgaagcagatcaactcggccgtcttt
ccggggctgcagggcggcccgctgatgcacgtcgtcgcgggcaaggcggtggccttcgcg
gaagccctgcgcccggagttcacgcgctatatcgaccagatgctgcgcaacgcgcaagcg
ctcgcacaggtgctgacggccggcggcctgacgctcgtgaccggtggcaccgacaaccac
ctgctgctggtcgacctgcgcgcgcggcgcattaccggcatgcaggccgagaaggcgctg
gagcgtgccggcatcacctgcaacaagaacggaattccgttcgatacggaaaacccgacc
gtcacgtccgggatccggctcggcacgcccgccggcacgacgcgcggcttcggaaccgcg
cagttcgagcagatcggcgacatgatcctcgcggtcctggcggcgctcgcgcgcaatccg
gacggggacgggggcgtcgagcgcgcggtccgcactcgcgtgcgcgatctgtgcgcccag
tttccgatctacgcacacgcggaggcgtttgcctga
DBGET
integrated database retrieval system