Burkholderia contaminans: NL30_37050
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Entry
NL30_37050 CDS
T03969
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
bcon
Burkholderia contaminans
Pathway
bcon02020
Two-component system
bcon02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bcon00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NL30_37050
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NL30_37050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcon03021
]
NL30_37050
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bcon02035
]
NL30_37050
Transcription machinery [BR:
bcon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NL30_37050
Bacterial motility proteins [BR:
bcon02035
]
Flagellar system
Flagellar assembly proteins
Stator
NL30_37050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AKM45428
LinkDB
All DBs
Position
3:complement(1451733..1452461)
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AA seq
242 aa
AA seq
DB search
MTSITFTEYENMQRASNGMLPRGEAHWVAEYAPLVRRVVGKHAGHGAVGIDRDDLEQIGL
MGLLEALRRYGEPNDAFPNYAVVRIRGAVLDELRRQDWRPRTARQRAHRLRSCERALRSK
LGCEPGKDDICAALGIDGVEYDRIMLDDSANELMNLDDLINAHGDVPGGGAQAGPEAQVL
ARRGIEQALLVLDEREQRVIQLYYEFDLTLPEIGAVLNLTTARICQLHRGALKKMRGYLE
RS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattacttttaccgaatatgaaaacatgcagcgtgcgtccaacggcatgctg
ccccgcggcgaggcgcactgggtcgccgaatatgcaccgcttgtcaggcgggtcgtcggc
aagcacgctggtcacggcgcagtcggcatcgatcgcgacgatctcgagcagatcggcctc
atggggctgctcgaggcgctgcggcgctatggcgagcccaacgacgcgtttccgaactac
gcggtcgtgcgcatccgcggcgcggttctcgacgaactgcgccggcaggactggcgtccg
cgtaccgctcggcagcgcgcgcatcggctgcgctcgtgcgagcgcgcgctgcgcagcaag
ctcggttgcgaacccggcaaggacgacatctgcgccgcgctgggcatcgacggcgtcgaa
tacgaccggatcatgctcgacgacagcgcgaacgaactcatgaacctggacgacctgatc
aacgcacacggcgacgtgccgggggggggggcgcaggccgggcccgaggcccaggtgctg
gcgcggcgcgggatcgaacaggcgctactggtcctcgacgagcgcgagcagcgcgtgatc
cagctttattacgagttcgatctgacgcttccggagatcggcgcggtgttgaatctgacg
acggcacgcatttgccaactgcatcgcggcgcgctgaagaaaatgcgcggctacctcgaa
cggtcgtga
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