Bradysia coprophila: 119066313
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Entry
119066313 CDS
T08269
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119066313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119066313
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119066313
mRNA degradation factors
5'-3' decay
Decapping complex
119066313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
WD40
Beta-prop_EML_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
119066313
NCBI-ProteinID:
XP_037024595
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All DBs
Position
IV:complement(12587796..12594453)
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AA seq
1181 aa
AA seq
DB search
MDTTKTSNITSTTITFKPDDNKHCFETNRAKNVVVVGSCVGTHDHGSSKIKLTNIVDYKW
KEKNYSGRLIAVHLNGRHVAYAIKVNNKDGVGEGMVRVFNSVTNSRELIKGMSNEVLDLQ
FAHMKSIVLLGSIEQTALHVHKIDDTPEKVLCTLMVKIEDPIAGHVPLYDKIKWCPFVPE
GEDEVDEYVGQQLVWFRGSVYQCYSIKSVVDAYGIGQQLSKNVIEGSLKQKESAVITGAT
FSPDGSTLSVSCQNGVIRFYQIYFHTNEQNPRCLHKWIPHGGKSITSVFFLDDHTTANPD
KSLWKYAVTTSDNNTELKVWCCSTWECLQTVNFKSPIPDRELIFQAEIDHKSSYLVMSDI
KSRSLYVLQIEKPNVQSINTTTTSANTSEMSIELEKTDNRTTPSAYIKSISEFPLSSPIL
SFGIVDAEVRRYKPNYNDNYLLDDMEEYDEENNSLYCVVIRMYLVQPKSVQECRVLYQPT
VSIHADVASTLSGSYKESSVELPAEINVLDKINNGSSKPSTENAVKIVNLTSPKSNKSDN
IPQTNSISLMTPDSFNSPGKLTPEGVSLEVLSTIRMLAKVQSPPDAKKKAETLNILNLVN
NKALEEHELKVSKSAELNKQIIVASTSPIISGGSSPSREVQEILSVKEDSENILNDEFYD
DNNDLLDENDADSVEKLDDAEPYFNQMNDGQEKTLSVNSKTDWPKIPKIPQVPVMSNIPN
TNTFNNVNSNTPLNDMAYKLDQVLEFMQTQACQISELRNAIEMKNNADDNKLKTISKNIE
FSVTKTIEDYLIRHEREHKKKLEAFIAERDKQNRDLRDAILHSVAQFITSQITDRLTSVM
MSEIPRHVLPVIHNHLEKMKVQILTDVGQKLRSCDQVIKESIMNVTSSKASMETFGNAVV
VGIQGGLQKTYIDTLKTTIIPSYERTTEELFRQIQSIFLQGTKSYTKQFDAYMSQYQPLH
DETSSMLLSVPEQLKSAGEASIATCTNRIQTDISKDLKALQVNLVKTVRDSVKKEIQKGF
ESHANSINESVLSAAHSQAHTPAPTLYDVQEQIKQHLAQGQINTAFHHALVANDLNLVEF
TLEKADYKQVFNPCPLQQPVLLSLIQQISADMTNHNDLKQRYLSDAIVSLDIHDATTREH
APKITRELYQHCQNFISANPHSPLVGGVKMLMMAVQGIKSA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggataccactaaaacatcaaacataacctcaacgacaataacattcaaacctgacgac
aacaaacattgtttcgaaacaaatcgtgcaaagaatgtcgttgtggttggtagttgtgtc
ggtactcacgatcacggatcgtcaaaaattaaattaacgaacattgtcgactacaaatgg
aaagagaagaactattccggccgcctcattgctgttcatctaaatggacgtcacgttgcc
tatgctatcaaagtcaacaacaaagatggtgttggcgagggcatggtacgtgttttcaac
tcggtgaccaacagtcgtgaattgatcaaaggaatgtcgaatgaagttcttgatctgcaa
tttgctcacatgaaatccatcgtactgctcggaagcatcgaacagaccgccttgcatgtg
cacaaaattgacgacacgccagagaaggttctctgcacgctgatggttaaaatcgaagat
ccgatagcaggacatgtgccgctttatgacaaaataaagtggtgtccgtttgtgccggaa
ggagaggatgaggtggacgagtatgtgggacaacagctcgtatggttccgcggtagcgtt
tatcagtgctacagcatcaaatcggttgttgatgcgtacgggattggacaacaactatcc
aaaaatgtgatcgaaggcagtttgaagcaaaaggaaagtgcagttatcacaggcgcaaca
ttttcgccagatggttcgacgttaagtgttagctgccagaacggtgtcattcgattctat
cagatctactttcacactaacgagcaaaatcccagatgtctacacaaatggattccacac
ggcggtaaatccattaccagcgtatttttcctcgacgaccatactaccgccaatccagat
aagtccctgtggaagtatgctgtaacgacaagtgataacaacaccgaactgaaggtgtgg
tgctgttccacatgggaatgcctgcaaaccgttaattttaaatcgccaatacccgacaga
gaactaattttccaagcggaaatcgatcacaagtcatcgtatctggtaatgtccgatatc
aagagtcgcagtctctacgtacttcaaatcgagaaacctaacgttcagagcatcaataca
acgacaacgtcggccaataccagcgaaatgagcatagagctggagaaaacagataatcga
actacgcccagcgcttatatcaaatcgatctccgaatttccactatcgtccccaatattg
agctttggtatagttgacgccgaggtgcgtcgctataagcccaattacaacgacaactat
ctgttggacgatatggaagagtatgacgaagaaaacaattctctgtactgtgtggtcatt
cgaatgtatctggttcagccgaaaagcgtccaggaatgtcgtgttctgtatcagccaacc
gtatcgatccatgcagatgtcgctagtacgttgtcgggaagttacaaagagtcttcggtg
gaattacccgccgaaattaatgtgttggacaaaatcaataacggcagctcgaagccgtcg
acggaaaatgccgtcaaaatcgtaaacctcacatcccccaaatcgaataaatccgacaat
attccacaaaccaacagcattagtctgatgactcccgattcattcaactcaccgggaaaa
cttactccggagggtgtcagcctcgaagtactgtcaaccattcgtatgttggctaaagtt
caatcgccgcctgatgctaagaagaaggcagagacgttgaatatcttgaatttggtgaac
aataaggcactggaagaacatgaattgaaagtgtccaaatctgctgaactcaacaaacaa
atcatagtcgcatcgacttcgccaatcatatcgggcggatccagtccgagtagagaggtt
caggaaattctgtcggtgaaagaagattcggagaatattttgaatgacgaattttacgac
gacaacaatgacctgttggacgaaaacgatgccgattcggtggaaaagcttgacgacgct
gagccatatttcaatcagatgaatgatggacaagagaagacactatcagtcaacagcaaa
accgattggccgaaaataccgaaaattccacaagttcctgtgatgtcaaatattcccaat
acaaatacattcaacaatgtaaacagcaataccccattaaacgacatggcttacaaattg
gaccaggtcttagaatttatgcagacacaggcctgccaaatatccgagctgcgtaacgct
attgaaatgaagaacaatgcagacgataacaaattgaagacgatatcgaagaatatcgaa
ttcagtgtgacgaaaaccattgaagattatttaattcgacacgaaagagaacataagaag
aaattggaagcgtttattgctgaacgtgacaaacaaaatcgcgaccttcgcgatgctatt
ctacactctgtggctcagtttattactagccaaataactgatcgactgacgagtgttatg
atgagtgagattccacggcacgtccttccagtcatacataatcatttagagaaaatgaag
gtgcaaatattgactgacgttggccagaaattgagaagttgtgaccaagttatcaaggag
agcatcatgaatgtgacatccagcaaggcatccatggaaacatttggaaatgctgtggtt
gtagggattcaagggggtctgcagaagacttacatagacacattgaaaacgaccattatt
ccgtcttatgaaagaacgacagaggagctattccgacaaattcagtcgattttcttgcaa
ggaactaaatcctatacaaaacaattcgacgcatacatgtcgcagtatcaaccattgcac
gatgaaacgtcgtcgatgctcttgtctgtaccggaacaactgaaaagtgcaggcgaagct
tccatagccacttgcaccaatcgaattcaaactgatatttcaaaagatctgaaggcactt
caagtgaatttggtgaaaactgtcagagacagtgtgaaaaaggagattcaaaaaggattt
gagagtcatgcgaattccatcaatgaatccgttttgtcggcagctcactcacaagcacac
actccagcgccaacattgtacgacgtccaggagcaaatcaaacagcatttggcccaaggt
cagattaacacagctttccatcatgcactcgttgcgaacgatttaaatttggtggaattc
acattggaaaaggctgactacaagcaagtatttaacccgtgtccgttgcaacagcccgtg
ctgctgtcattgattcagcaaatttcggccgatatgaccaaccacaatgacttgaagcag
agatatttgagtgatgcaatcgttagtttagatatacatgacgcaaccacccgagaacat
gcaccgaaaataacgcgggaattgtatcagcattgccagaatttcataagcgcaaatccg
cacagtccacttgtcggaggtgtgaaaatgcttatgatggctgtgcagggcataaaaagt
gcctga
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