Bradysia coprophila: 119066459
Help
Entry
119066459 CDS
T08269
Name
(RefSeq) pectate lyase A-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo00040
Pentose and glucuronate interconversions
bcoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119066459
Enzymes [BR:
bcoo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119066459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
119066459
NCBI-ProteinID:
XP_037024859
LinkDB
All DBs
Position
IV:2364128..2365182
Genome browser
AA seq
311 aa
AA seq
DB search
MNNRILLSFYLLAISIQLVNSQDGFASVGEGTTGGAGGNTVDVCTEDELTTAIIDDTPRI
VRVVCNITLEHRLFVGSNKSILGRTAGAGIAFQGLRIHSKKNVIIRGLQFCCAFDPSDGV
TVENSTNVWIDHNEFYSDMDHHEDYYDGLVDVIMGSDFVTISWNQFRNHWKTSLVGSSDS
RGDVDIGRLHVTYHHNYFQNCNSRMPSLRFGTGHIYNNFYENIVEYAINSRMGAQVLVEG
NVFRNATLAITTSLYSIEEGYAVERNNDFGGSNNNITQVGTFTNPPYSYRIDRTSKIPYL
VRQHSGQTILF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagaattttattaagtttttatttgctcgctatttcgattcaattagtgaat
tctcaagatggttttgcatccgtaggggaaggaacgacaggaggtgctggtggtaatact
gtcgatgtttgtactgaagatgaattaacaactgctataattgatgacactcctaggata
gtgagagtagtctgtaatataactttggagcatcgactgtttgtcggttccaacaaatca
attctgggtcgtacagctggtgcgggaatagcttttcaaggcttgagaatacatagcaag
aaaaatgtaataatccgaggacttcagttttgttgcgcatttgatcctagtgacggagtc
actgttgaaaattcgacaaacgtgtggattgatcataatgaattttactctgacatggat
caccacgaagattattatgatggacttgttgatgttattatgggctccgatttcgtcaca
attagttggaatcaattccgcaatcattggaagacgagcttagttggaagttcggatagt
agaggtgatgtggatattggacgcttgcatgtcacctaccatcataactattttcaaaat
tgtaattcgagaatgccttcgctaagattcggaacgggtcacatttacaacaatttttac
gaaaatattgtggaatatgcaattaatagtagaatgggagctcaggtacttgttgaaggg
aatgtttttcgcaatgccacacttgccattacgactagcctttatagcatagaagaaggc
tatgcagttgaaaggaacaatgactttggtggatcaaataataatatcacacaagttgga
acatttaccaatcctccatattcataccgaattgatcgcacttcaaaaataccgtattta
gtgcgacaacattcgggacaaacaattttattttaa
DBGET
integrated database retrieval system
