Bradysia coprophila: 119066580
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Entry
119066580 CDS
T08269
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bcoo01009
]
119066580
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119066580
04131 Membrane trafficking [BR:
bcoo04131
]
119066580
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119066580
Enzymes [BR:
bcoo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119066580
Protein phosphatases and associated proteins [BR:
bcoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119066580
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119066580
Membrane trafficking [BR:
bcoo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119066580
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119066580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
119066580
NCBI-ProteinID:
XP_037025035
LinkDB
All DBs
Position
II:3578567..3581759
Genome browser
AA seq
701 aa
AA seq
DB search
MMNLKRGKTGLIYDFRMTEHRCLWNSGYPECPERFTRILARCDELKLIERCHSIPSRPAT
LNEILLKHTREHYDVLKAFDGETDEEKLEEMCTHYDIFIHPSTFELSMLAVGCAVELVDK
ILLGEVQNGMAVIRPPGHHAMESRFDGFCFFNNVAIAAQHAINNHSVNRILIVDFDVHHG
NGTQQLFYDDPRVLYFSIHRFDYGIFFPGLRESDFDYVGEGRGIGFNFNVALNKSGMTNS
DYLAIWQQILLPVATEFQPELVLISAGYDAAYGCALGEMEITPACYAHLVSPLAALANGR
IAAFLEGGYNLESLAESAAITLKTFLGDPCPLLEMLDEPSDSVRDSILNCIQSHKAYWSS
LQVHKEYSLSAPIGDKSNIHEVIQKFIDDKALNPWHNCEYYDPHMIFSNQTRSKETDEKI
SKHLQHLKSVTNLDKPLNRTCIVVSERSVDIERFLLEHDLSDSLYQPDKRYQPLTTPLTL
ELLQNVLEEKYLNGIHMEIGESTVADNIALASQYATEVHGLTRVLVVDLCKTNRQNIDTQ
PDGNGNILYTSLSLGDAKDTCYNGNGVNVPMNKETVGDSDYVAAFQRIIMPIAYEFNPEL
VLVSADFAAINELFEANISAEIFGYLAHWLSALANGKVILFLKGECNATSTSINGLFGNP
LKMPKRQTGTKVNNIETIQSVLTIQQNNWKSLKFNKMLPSA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttaaagagaggaaaaaccggtctgatctatgacttccgtatgaccgaacat
cgttgcctttggaatagtggttatccagaatgcccggaacgatttacacgaatactagct
cgatgcgacgaattaaaacttattgagcgttgtcattcaataccgtcccggccggctaca
ctgaacgaaattcttcttaagcatactcgtgaacattatgacgtattgaaagcgtttgat
ggagaaactgacgaggagaaattggaagaaatgtgcactcattatgacatattcattcat
ccgtctacgtttgagttatcaatgttagcagtcggctgtgccgtcgaattggtagataaa
atacttttaggtgaagtacagaatggcatggctgttattcgtccgccaggtcatcatgca
atggaatcacgatttgatggcttctgctttttcaacaacgttgcgattgctgcccagcat
gccatcaataaccattccgtgaaccgaatcctgatcgttgactttgatgtccaccatggt
aatggtactcaacaattattctatgacgatcctcgagtcttatatttttccattcatcga
ttcgactatgggatatttttcccaggtttacgcgaatccgattttgattatgtgggcgag
ggaagaggtatcggttttaatttcaacgtggcattgaataaaagtggaatgacaaattca
gattatttggctatttggcaacagattcttttgccagtagctacggaatttcaacctgag
ttagtactaatatcagctggatatgatgctgcttatggatgtgcattaggtgagatggaa
ataacacccgcatgttatgcacatttagtatcaccattagctgctcttgctaacggtagg
attgctgccttcttagaaggtggatataatctcgaatctttggctgaaagtgcagcaatt
acattgaaaacatttttgggtgatccgtgtccactcctagaaatgttggatgaaccgagc
gacagtgttcgagacagcatcttgaactgcattcaatcgcacaaagcatactggtcatcc
ttacaagttcacaaagagtatagtctttcggccccaatcggcgacaaatctaatattcat
gaagttattcaaaaattcatcgacgataaagcactgaatccttggcacaattgcgaatac
tacgatccgcacatgattttctctaatcaaactcggagtaaggagactgacgaaaagatc
agcaaacatcttcaacacttgaagagtgtcaccaatctcgataaacctttgaaccgaacc
tgcatcgttgtttcggaaaggagcgtagatatcgaacgatttctgttggaacatgatttg
tcggatagtttatatcaaccggataaacgttatcaacctttaacaactccattaactttg
gagctgttgcaaaatgttctcgaagaaaaatacttgaatggaattcatatggagatcgga
gaaagtacggtcgcagataatattgcattagcatcgcaatatgcgactgaagtccacgga
ctgacacgtgtattggttgttgacttgtgtaagaccaaccgacagaatatcgacacgcag
cctgatgggaacggaaacattttgtatacgtccttgagtcttggcgatgccaaggacact
tgctacaatggcaatggtgttaatgttccaatgaacaaggaaacagtcggtgattccgat
tatgtggcagcatttcaacgaatcatcatgcctatcgcttatgaattcaatccagaattg
gtgttggtttctgcagattttgctgcaatcaatgaactttttgaagctaatatttcagcg
gaaatattcggctatttagcacattggctctcagctttggccaatggaaaagtgatcctt
ttcttgaaaggtgaatgcaatgcaacatcaaccagtatcaacggattgtttggaaatcca
ttaaaaatgccaaaaagacaaaccggcacgaaagtgaacaatattgagactattcaaagt
gtcctgacgattcagcagaacaattggaagtcgttgaaatttaataaaatgttgccatcc
gcataa
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