KEGG   Bradysia coprophila: 119066776
Entry
119066776         CDS       T08269                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
bcoo  Bradysia coprophila
Pathway
bcoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bcoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119066776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bcoo03041]
    119066776
Spliceosome [BR:bcoo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    119066776
 Complex C
   U5 SnRNP specific factors
    119066776
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_SCAP WD40_RFWD3 eIF2A Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 KNTC1_N Cytochrom_D1 WD_LRWD1 RMC1_N
Other DBs
NCBI-GeneID: 119066776
NCBI-ProteinID: XP_037025330
LinkDB
Position
IV:complement(6065331..6067268)
AA seq 348 aa
MAYKRPSDSLVAIPDIKRSKNEIAAYTNKDKQLLEVGVQRTSGLLGPIMLLEGHQGEVFS
CEFHPEGQHLVSTGFDRQIYIWNVYGECENISVMSGHTGSIQEIHFSPDGASLYTCSTDK
NLSIWDVQTSQRIRKLKGHNGFVNSCQGSRRGMQMLVSGSDDNSIKIWDSRKRYAVNTLD
NTYQVTAVSFNDTTECVITGGIDNDIKVWDMRKNEVLYRLRGHIDTVTGIALSPDGSYVL
SNSMDNTLRIWDIRAYAPTERCVKIFTGHQHNFEKNLLRCAWSPDGSKITAGSSDRFVYI
WDTTSRRVLYKLPGHNGSVNDVDFHPKEPVILSGSSDKSLYLGEVESS
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggcgtacaaacgcccatccgatagtttagttgctattcccgacataaaacggagtaaa
aatgaaatcgctgcctacacaaacaaagacaaacagctcctggaagtgggagtacaacgt
acatctggtttgttgggtccgatcatgcttctggaaggacaccagggcgaagtgttttct
tgtgaatttcatccggaaggtcaacaccttgtgtctaccggcttcgatcgacagatttac
atctggaatgtgtacggtgaatgtgagaatataagcgtaatgtctggccacaccggatcc
attcaagaaatccatttctctcctgacggcgcaagtttgtacacctgttcaacggacaaa
aacctatcgatctgggacgtacaaacatcgcaacgaatccgcaaactaaagggtcacaac
ggcttcgtgaactcatgccaaggttcccgacgcggcatgcaaatgctggtctccggatcc
gatgataattccatcaaaatctgggattcacggaagagatatgcggtcaatacattggac
aatacgtatcaggtgacagcggtctcgttcaacgacaccaccgaatgtgtcatcaccggt
ggcatcgacaatgacattaaagtgtgggatatgcgtaagaacgaggttctttatcgttta
cgcggacacattgacacagtgacgggtattgcactatcgccggatggttcatatgttctg
tcgaattcaatggacaatacgctgaggatttgggatattcgagcttatgcaccgactgag
cgttgtgtgaaaatattcaccggacatcagcacaattttgagaagaatttactgagatgt
gcatggtctccagatggatcgaaaatcacagctggttcatcggatcgttttgtgtacatt
tgggatacgacatcgagacgcgttttgtacaaactacccggtcacaatggcagcgtgaac
gacgtagatttccatcctaaggaaccagtcattctatccggatcaagtgataaaagtttg
tacctgggcgaagtggagagttcataa

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