Bradysia coprophila: 119066856
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Entry
119066856 CDS
T08269
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119066856
03041 Spliceosome [BR:
bcoo03041
]
119066856
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119066856
Spliceosome [BR:
bcoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119066856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119066856
NCBI-ProteinID:
XP_037025419
LinkDB
All DBs
Position
IV:15209400..15218479
Genome browser
AA seq
1259 aa
AA seq
DB search
MDAVIVFNTELSGLYEQRPPISKAKMASITRTAMKAIKFYKHVVQSVEKFILKCKAEYKV
PGLYVIDSIVRQSRHQFGAEKDVFAPRFARNMQNTFANLFRCAAEDKSKIIRVLNLWQKN
SVFAPEVIQPLFDLADPNHIIYQNQPPLDSSSNGMNLNSSMNQESPPPNMDDGHTMSSDT
SGPMAIPTASQLDSSTIRQLQQLQQLLIRQTGSENMGASSSSTAQDSVKFNKKVLDYDYG
DEEDEDNDNRTMTPRNQNNLLSESNSIAQLLNDPNVLRQLQNLQKLKQQEEKQSKLTEMR
LQEEAFEKHLATVLKVNKLPFANECDLSRQPADQNQIFGMPSALSLMQQNNLAGPSDQIE
PEIELVSDDGKVEVINLDGNSRSPSMDRDRYNKRRRSRSRSRDRSGRSRRRSRTRSPRSR
RRSRDRDRGKDKDKERTREMEREYERERRRKGLHDIKKEHLSVCSTTLWVGHLSKLVQQE
ELSDTFAKYGDIISIDMIIPRGCAFLVMNRRQDAYKAMSSLKNYKLQGRPIMISWAAGKG
VKGKEWKDYWDLDTGISYIPYNKLSNSTDFESLEEGGMFDEDSMPAWLKEKLKSSAQKKD
PLLPMDPSQMFQMNMTGRVDTTQPPPSGQMIPGMQMVPPFMGPVPRLMTPMGLMAPNLVP
GLSIGVPPPTMMIPTGAILPPIPMDKSVPPPSSTGNQPAFMNHFPPMPPHQMSHLPPVSI
PSNSDDHMDIEMDDEPSTKVVSSSTNVSMFNRPPPQMFDQSMPPIPANMTQSYNKDHNDR
ERRQGHDRRSNSRDRRSNERELRGRDRDRDRDNRRSDRNFRNGSNSRWPDERSRSRDDDN
SFRDSRRGSRDRNDRNERDKSLQDRLRDMANDGNRNEYNRRNETGDGMPWRDGPQMSGNF
QGNFMDQNVRNIRPMNMGPTPLEDIRLAPMVMDNIRGPPPGMGHRGDFNRSDEFDNRRGG
PHREFFGPNRFGGPMIRGGPPPPFGPRMVNTPLFMRGQRPPGPGFPERPFFDRAGGFDER
GAPRNPRNVENRRDDSVNRPAWNAAAKDEDRVPANNSEQNESKDKKASRWGNSSPKSIVS
EEENWDDEIERKNDDNSPIVPLPQTEPIDDDSDVDFDDGAAAAALTEKSAQSEISVADSR
NENVETVDEPQHSVPLQQQSVDVKQNIPERFDIFDDNETAATKQPQPTAFNNSDDDKDTE
TSENRNESAECNTTPLYDEPEEKKHSTEKDEQHDVETNSESTNENKPEAELPTVPGVDD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagtaattgtgttcaatacggaattgtccggtctttacgaacagagaccaccg
atttctaaagctaagatggcatcgatcacacggacggccatgaaagccattaaattctat
aaacacgtcgtccaaagtgtcgagaaattcattctcaaatgtaaggcggaatacaaggtg
cccggcttatatgtgatcgattccattgtgcggcagtcacgccatcaattcggtgctgaa
aaggatgtatttgctccgagattcgcccgtaatatgcagaatacgtttgcgaatttgttc
cggtgtgccgccgaagacaaaagtaaaattattcgggtgctgaatttgtggcagaagaac
agtgtttttgcgccggaagttatacaaccgctgtttgatctggccgatccgaatcacata
atttatcaaaatcaaccgccattggactcctcctcgaatggcatgaatttgaattcgtca
atgaatcaggagtctccgccaccgaacatggatgatggtcatacaatgtcttcggataca
tctggacctatggcaataccaacagctagtcagttggactctagtacgatacgtcagctg
caacaactgcagcagttgttaatacgtcagacgggaagtgaaaatatgggtgcgagtagc
agtagtactgctcaagattcggtgaaattcaataaaaaggttctggactacgattacggt
gacgaagaagatgaagacaacgataataggacaatgacacccagaaatcaaaacaatttg
ctatctgaaagtaacagcatcgcccaactactgaacgatccgaatgtattgcggcagctg
caaaatttgcagaaattgaagcaacaagaagagaagcaatcaaaactgaccgaaatgcgt
ctacaggaggaggcgttcgaaaagcatttggcaaccgttctaaaagtaaataaacttccg
ttcgcaaacgaatgcgatttaagtcgacagccagccgatcaaaatcaaatctttggaatg
ccgtcagccctcagtcttatgcaacagaacaatttagctggtccatccgatcaaatcgaa
ccagaaattgaactagtgtccgacgatggaaaagtggaggtaatcaacttggatggcaat
tcacgtagtccgtcaatggaccgcgatcgttacaataaacgaagacgcagtcgttcacgg
tcaagagatcgcagtggtagatcccgtcgacgcagccgaacccgttcaccaagatcgcga
cgacgatctagagatcgtgaccgtggaaaggacaaagataaggagagaacgagagaaatg
gaacgtgaatatgagagagagcggcgtcgaaagggattgcatgatattaagaaggaacat
ttgagtgtttgcagtacgacattgtgggtgggacatttgtcgaaactcgtgcaacaagaa
gaactttccgacacttttgctaagtatggagatatcatcagcattgatatgatcattccg
cgaggatgtgcatttctagtaatgaatcgtcgacaagacgcatacaaggctatgagtagc
ttgaaaaattacaaacttcaaggaaggcccattatgatatcatgggcggctggtaaaggt
gtcaaaggcaaagaatggaaggattactgggacttagatacaggcattagctatatacca
tataacaaattgagcaattcaacggactttgaatcgctggaagagggtggcatgttcgac
gaagattctatgcctgcttggctgaaagaaaaactcaaatcgtcggcacaaaagaaagat
ccattactgccaatggatcccagccaaatgtttcaaatgaatatgactggccgagtggac
acaacccaacctccgccgagtggacaaatgattcctggaatgcaaatggttccaccattt
atgggacccgttccaagacttatgacacccatgggattaatggcaccgaatttagttcct
ggcttatcgataggcgttcctccgccaacaatgatgatcccaactggcgcaatattgcca
ccgattcctatggacaaatcagttcctccgccatcgtcaacgggtaaccagccagcattt
atgaatcactttccaccaatgcctccacaccaaatgtcacatcttccaccagtttcgatt
ccatcgaacagtgacgatcatatggatatcgaaatggatgacgagccatcaacaaaagtc
gttagctccagtactaacgtaagcatgtttaatcgaccaccgcctcagatgttcgatcag
tccatgccaccaataccagcaaatatgacacaaagttacaataaagaccacaacgatcgt
gaaagacgacaaggacatgatcgtcgtagcaacagccgcgatcgaagaagtaatgagcgc
gaactacgtggtagagatcgagatagggatcgtgataaccgtcgcagcgatcgtaatttc
cgaaatggatccaattctcgttggccggatgaacgaagtcgatcccgcgatgatgataac
tcgtttcgtgatagtcgaagaggatctcgtgaccgaaatgatcgaaatgaaagagacaaa
tcgcttcaagatcgcttgcgcgacatggccaatgatggtaatcgcaatgaatacaatcgt
cgcaatgaaaccggtgacggtatgccctggcgtgatggaccgcaaatgagtggcaatttc
cagggcaattttatggatcaaaatgttcgcaatatcagaccaatgaacatgggaccaaca
ccattggaagatattcgattagcaccaatggttatggataacattcgcgggccgccacca
ggaatgggacacagaggagattttaaccgtagcgatgaattcgacaatcgacgtggtggt
cctcatagggagttcttcggaccaaatcgttttggagggccaatgattagaggcggacca
ccaccaccattcggtcccagaatggtaaatacaccattgttcatgcgtggacaacggccg
ccaggaccaggttttcctgagcgaccattctttgatcgtgcaggtggcttcgacgagcgc
ggtgctcctcgtaatccccgaaatgtcgagaaccgcagagatgactcagtaaatcggcca
gcatggaatgcagccgcaaaggacgaagacagagtgccagctaacaactccgaacaaaat
gaatcgaaagataagaaagcgtcccgttggggcaattccagtccgaagtcgatagtatcg
gaagaagaaaactgggacgatgaaatcgagcgtaagaacgacgacaattctccgatagtt
ccgttgccacaaaccgagccaatcgacgacgatagtgatgttgactttgatgacggtgca
gcagctgctgctttaactgagaaatctgctcaaagcgaaatcagtgttgctgatagtagg
aatgaaaatgtggaaacggttgatgagcctcaacattcagtgccattgcaacagcaatcc
gttgacgttaaacaaaacatacccgaacgattcgacatatttgacgacaacgagactgct
gccaccaaacaaccacaaccgacagcatttaataatagcgacgacgataaggatactgaa
acgtccgaaaaccgtaacgaatcagctgaatgcaatacaacaccattgtacgacgaaccg
gaagagaaaaagcacagcacagagaaggatgaacagcacgacgttgaaaccaatagcgaa
tcaacgaatgaaaacaaaccggaagccgaattgccaaccgttcctggagttgatgattga
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integrated database retrieval system
