Bradysia coprophila: 119066891
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Entry
119066891 CDS
T08269
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
bcoo
Bradysia coprophila
Pathway
bcoo04140
Autophagy - animal
bcoo04142
Lysosome
bcoo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119066891
04140 Autophagy - animal
119066891
04148 Efferocytosis
119066891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcoo04131
]
119066891
Membrane trafficking [BR:
bcoo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119066891
Hops complex
119066891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_2
WD40_Prp19
zf-C3H2C3
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
zf-RING_Vps41
TPR_11
zf-rbx1
zf_RING_Vps8_fungal
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
119066891
NCBI-ProteinID:
XP_037025473
LinkDB
All DBs
Position
IV:8515334..8519413
Genome browser
AA seq
1045 aa
AA seq
DB search
MAIFEWRKFNFFDLQGNVDNGKVAEALKDATITSSTNGNNQIILCDSMGLIHLFNRNWDA
TSFKGHDGSISLCEIATQHNLLITVGDDESGSAPAFKVWNLSKTTKNAVSCLRTVRTALQ
KPTALGVSENGQFMAIGYDRGSISLYRGDISRDRSKNVKTLSGGISPITGIQFKQCGKVV
QMFVCSDSGVLVYSLQHKDKEPKIVLDKTCEPTRCCALQKSSVGLNETHFMVGRDDAVYC
YTIDGRGPCYALEGQKSIIQWFRSHLLTVSKPNKNTISTQKDSILTVIDISNKFIVFSSP
IDATATILVEFGTCYIITTGNEVFHLDEKDLQSKLTLLFKKNLYDIAVRIAKSNQYDSEG
LAEIFKQYGDHLYSKGDFAGAVEQYSKTIGYLEPSYIIRRFLDSRHINFLTDYLQALHKQ
GHATSDHTTLLLNCFTRLDRTDQLKEFLSNDTNPDIIFDLEVAIKVCRTASAEHALSLAK
RNQKHDLSISILTEDQGAFFEALAYISNLKFSDAEANLKKYGFILMEKCPIETTELLKKL
CTNYRERNARSDMDFLDASAHIDRANCEDFIHLFVNSPERLIDFLEHLVRNLTDCSQLVY
NTLIEHYLCEWKTNPKLEERLMDIMKNHVESFDRNHVLILCSTYDYWPGIMLIYEEQKLY
HLIVRHYLKNRDYNSLLNICKRLGQNQPQLWLQALTGLRKDKTAPANLLPQILQVIAQEK
LQSPLQVLNCLAVENGPSLSSVREYFLQVFQKEYESTKQEEEAVEKYRSDSVVLKNHIKN
LQETTIEFRGTLCDTCHQPLSMPALYFLCQHAYHQDCARGFSETDKDSPVCHKCHTKNDQ
LADALRAQSESRGQHELFHNLLDRSTEPFSVVAEYFGRGLFNEIVLVEEDNDEINRNVVE
INQRNASQSQINPFNSYGAGAEAKLRIDEGSTAKNRQDPARKIPIPEARMRLQESNKFST
SLEANITRPPHIRDKSPKVTPFGSPRRPTNTISNSIANQRAKNPFDDDDGYDDAKNPFAE
DDDGVTDADKNNPFEEYDNNLNPFA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttcgagtggcggaaattcaattttttcgacttgcaaggaaatgttgacaat
ggaaaagttgctgaagccttaaaggatgcaacgataacatcgtcaacgaatggaaataat
cagataatactgtgtgactcaatgggtctgattcatttgttcaatcgaaattgggatgca
acttcgtttaagggtcacgacggatctatttcattgtgcgaaatagcaacgcagcataat
ttgctcattactgtcggggatgacgaaagtggatcggcgcctgcattcaaagtgtggaat
ttatcgaaaacaaccaaaaatgccgtttcctgtctacgaacggtacgaactgccttacaa
aagcccacagcgctcggtgtgtccgaaaacgggcaatttatggctatcggctacgatcgc
ggcagtatttcattgtaccgcggtgacatcagtcgtgatcgatcgaagaatgtgaaaacg
ttatcgggtggaatatcacccattacgggaattcagttcaaacagtgcgggaaagttgtt
cagatgttcgtgtgttcggattccggagtgctggtgtatagtttacagcataaggacaaa
gagccaaaaattgtgctggataaaacgtgcgagccaacgaggtgttgcgctttgcaaaaa
tcgtctgtgggattaaatgaaacgcatttcatggtcggacgggatgatgccgtctactgt
tacactattgatggtcgtggtccgtgttatgctttggagggtcagaaatcgatcattcag
tggttccgttcgcacttactaacagtatccaaaccgaataaaaacacaatcagcacccaa
aaagactcaatcctgaccgtcattgatatttcaaataaattcattgtgttctcgtcaccc
atcgatgcaactgcaaccattttggtggagttcggtacgtgttacattataacaaccggc
aacgaggtgttccatttggacgaaaaagatctgcaaagcaaattgactttgctgttcaaa
aagaatttgtacgacattgccgtgcgcatagccaaaagcaatcagtacgattcggaaggg
ttggccgaaattttcaaacaatacggtgatcacttgtacagtaagggtgactttgccggt
gctgtggaacagtatagcaagactattggatatttggagccgtcctacattattcggaga
ttcttggattcgaggcacattaactttttgacggattatctgcaggcacttcacaagcag
ggacacgccacctctgatcacacaaccctactgctgaattgcttcacacgtttagacaga
acggaccaattgaaggaatttttaagcaacgacaccaatcccgatattatattcgatcta
gaagtagcaatcaaagtatgccgtactgcatcggctgaacatgccctgtcgctggcgaaa
cgcaaccaaaaacacgatctatcaataagcatactgaccgaagatcaaggggccttcttc
gaagcactggcttacatttccaatttgaagttcagcgatgcggaagccaatctgaaaaag
tacggtttcattttgatggaaaaatgtccgatcgaaacgaccgaattgttgaagaaactg
tgcacaaattatcgcgaaagaaatgcacgtagtgacatggatttcttggatgcaagcgcg
cacatcgatcgagccaattgtgaagatttcattcatctgtttgtcaactcgccggaacga
ttgattgactttttggagcatttggtgaggaatttaaccgactgcagtcaattagtttac
aacacgctgatcgaacactatctgtgcgaatggaaaacgaacccgaagttagaggaacga
ttgatggatatcatgaaaaatcatgttgaatcattcgatcgaaatcatgttctgatcttg
tgcagtacgtacgactattggccgggtattatgctgatctatgaagagcaaaagctatat
catttgatcgtgcgccactacttgaagaatcgtgactacaacagtttgctgaacatatgc
aaaagactgggtcagaatcaaccgcaattgtggctgcaagcactgactggacttcgtaaa
gacaaaacagcaccggctaatctattgccccaaatattgcaagtcattgcacaggagaaa
ctacagtcaccgttgcaagtattgaattgtttggcggttgaaaatggtcctagtctgtcc
tcggtgcgagagtactttttgcaggtattccagaaggaatacgaatcaaccaaacaggag
gaagaagcagtagaaaaataccgtagcgattctgttgtactcaagaatcacataaagaat
ctacaagaaacaacaattgaattccgaggaacgctctgtgatacttgccatcaaccgtta
agtatgccggcactgtatttcctctgtcaacatgcataccatcaagattgcgctcgaggc
ttttccgaaacagacaaagacagtcccgtatgtcacaaatgtcacacaaagaacgatcaa
ttagctgacgctctgcgtgcgcaaagcgaatcgcgtggtcagcatgaactattccacaat
cttctggaccgatccaccgaaccattcagtgtggttgctgagtactttggtcgaggtctt
tttaacgaaattgttttggtggaggaagacaatgatgagatcaaccgaaatgtggtcgag
ataaaccaacgcaatgcatcccaatctcaaatcaatccattcaacagctatggagcggga
gccgaggcaaaacttcgcatcgatgaaggcagtacagccaaaaatcgccaagatccggct
agaaagattccaattcctgaagcacgaatgcgtctccaggaatcgaacaaattttccaca
agtctcgaggcaaacataacccgtccgccgcatattcgggacaaaagtccaaaggtcaca
ccgttcggcagtccgaggagaccgacaaacaccatatcgaatagcatagccaatcaacga
gcaaaaaatccgttcgatgatgacgatggttatgacgacgcgaagaatccgtttgcagaa
gatgatgatggagtcaccgatgccgacaaaaacaatccattcgaggagtacgataataat
ctgaatccatttgcttag
DBGET
integrated database retrieval system
