Bradysia coprophila: 119066939
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Entry
119066939 CDS
T08269
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03430
Mismatch repair
bcoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119066939
03460 Fanconi anemia pathway
119066939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119066939
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119066939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119066939
NCBI-ProteinID:
XP_037025552
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Position
IV:8826916..8830320
Genome browser
AA seq
917 aa
AA seq
DB search
MDNLEATSEAAKAIRPIHSSTVHKICSGQVVLNLATAVKELVENALDAHATIIEVKLRDQ
GIESIEVSDNGDGVEESNFEGLTAKYHTSKLREFTDLECVETFGFRGEALSSLCALSKMV
ITTRHRGADFGTRLELDDRGTIIKKEICARQNGTSVQLTNLFGSLPVRKKEFTRNIKKEF
AKMCQILQGYCLVATGVRIMCTNQTVKGTKSLIMATNGGHSVMDNISAIFGTKQVFDVLQ
ITPPAELDETQTKALLEELDPNSSSENVDSLSEIDLKRFTIDGWISTCHHGSGRSSKDRQ
FIYINSRPCEPKKISKIVNEIYSRYNSNQNPFVFLNIIVQRSDVDVNITPDKRQLLLNNE
NVLLLVLKACLSKTFENVPSVFKMQNLNLSASSAANKSKIDTAPNAKKFSQMLSQWKKTG
HTDNPIKSEKIVKRKVCDEVESRNLKMRKIQEYLSQKHDETIPMSDDETLSSSIDQSMID
RSRTTEIDSSYLNTPESTSTPERQHDLKVEQTSPFKIIDSYKGVTGPSRVKSESILSRIM
KTEAAGTTRKINSPIKAETKAKPNKTPTKDVESIIGKLANRPEWDSEDNQSDTSSRSDDD
LDEDNEENGEGSDEEDDEHNDEENEEVNDDENEEGSEKYDSENDSLVDADQIGFKTQCTR
DMSDVVSTSIDEISELMAAELEIIERLENKSLMDRLKFKATIEPAKNKLAEEELQTEITK
KSFSQMEIIGQFNLGFIVVKLNDDLFIVDQHATDEKFNYETLQKETTLYNQKLVVPQHLE
LTAVSEMILIDNLEVFEKNGFKFQIDHDALPTKKIQLTAKPMSKGWQFGKDEIDELIFLL
QESPNSVLRPSKISAMFASRACRKSVMIGTPLSGSDMQRLISQMGEIEHPWNCPHGRPTM
RHLVNLTMVNDSSAEDS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggataaccttgaagcaacaagtgaagctgcgaaagccattcgtccaattcattcttcg
acagtacataagatttgttcaggacaggttgtacttaatctggccaccgcagttaaggaa
ttagtcgaaaatgccctagatgcccacgctaccataattgaagtaaaactgcgtgaccaa
ggaatagaatcgattgaagtgtcagacaatggggatggtgtcgaggaaagtaacttcgaa
ggtttaactgccaagtatcacacatcaaaattgcgtgaattcaccgacctggagtgtgtc
gaaacgttcggttttcgtggtgaagcattgagttcattgtgtgctctatcgaaaatggta
atcacgacacgacaccgaggtgccgactttggaactcgtttagaactagacgatcgtggt
acaatcataaaaaaggaaatttgtgctagacaaaatggtacttcagtccagctgaccaat
ctgttcggttcactaccagtccgtaagaaggaattcacacgaaacatcaaaaaggaattt
gccaaaatgtgtcagatcttgcaaggatattgcctagtagccacaggtgttcgaattatg
tgcaccaatcaaacggttaaaggcaccaaatctctcattatggctacaaatggtggtcat
tcagtaatggacaacatttccgcgatatttggaacgaaacaagttttcgatgtgttacaa
ataacacctcctgcggaactcgacgagacacaaactaaagcccttctggaggagcttgat
ccaaactctagtagtgaaaatgtcgacagtctaagcgaaattgatttgaaacgcttcacc
atcgacggttggatatccacttgtcatcatggatccggtcggagcagcaaagaccggcaa
tttatttacattaactccaggccatgtgaaccgaagaaaatatcgaaaatcgtcaacgaa
atttacagtcgatacaacagcaaccaaaatccatttgtcttcttgaacatcatcgtacaa
agatcggatgtggatgtcaatattacaccagacaaacgccaactattgctgaataatgaa
aatgtgctgctattagtgctgaaggcttgtctatcgaaaacatttgaaaatgttccttca
gtgttcaagatgcaaaatttaaatttatcggcatccagtgcagccaataaatctaaaatt
gacactgctcccaatgccaaaaaattttcacaaatgctgtcgcagtggaagaagactgga
cacactgataatcccatcaaatcggagaaaatcgttaaacgaaaagtttgcgatgaagtg
gaaagtagaaatttgaaaatgcgaaaaatccaggaatatctgagccagaaacatgacgaa
acaattcctatgtcagacgacgagacactatcttcgtcgattgatcaatcaatgattgat
aggagtcgaacgaccgaaattgattccagctacttgaatacgcctgaaagtacaagtact
cccgaacgacagcacgatttgaaagtggaacaaacgtcgccattcaaaatcattgactca
tataaaggggttactggtccatcgagggtcaaaagtgagtcgattttaagtcgaataatg
aaaactgaagcggctggaaccactcgcaaaattaattcacccatcaaagccgagaccaaa
gcaaagccaaataaaactccaacaaaagacgttgagtccattattggcaaactagcgaat
cgacctgagtgggattcggaggacaaccaatctgatacgagttctcggtctgatgatgac
ttagatgaagacaatgaagagaatggggaaggcagtgacgaagaagacgatgaacacaac
gatgaagagaacgaagaagttaacgatgatgaaaacgaagaaggcagcgagaagtacgac
agtgaaaacgacagccttgtcgatgctgaccaaattggcttcaaaacccaatgtacgcgt
gatatgtctgacgtcgtctcaacgtcaatcgatgagatttctgaactgatggccgcagag
ttagaaataatcgaacgactggagaacaagagcctgatggatcgattgaaattcaaagca
acgattgaaccagctaaaaacaaactagcagaagaagaactgcaaacggaaataacgaaa
aaatcgttctcccaaatggaaatcatcggacaattcaatttgggattcatagtggtgaaa
ttgaacgacgatctcttcattgtcgatcaacatgccaccgacgagaaattcaattacgaa
acactgcaaaaagagaccactttgtacaatcagaagctagtagttccacagcatttggaa
ctgacggcagtgagtgaaatgattttgattgacaatttggaagtgttcgaaaagaatggt
ttcaaattccaaatcgaccatgatgccctgccaacgaagaagattcaactaactgccaag
ccaatgagcaagggttggcaattcgggaaagacgaaatcgatgaactaatatttctcctc
caagaatcgccaaattcggttctacgaccgtcgaaaatcagcgctatgtttgcttcacga
gcctgtagaaaatcggtgatgattgggacaccattatcgggatctgatatgcaacgactg
atcagtcaaatgggagaaatcgaacatccctggaattgtcctcatggcaggccaacgatg
aggcatttggtcaatttgacaatggtcaatgattcttctgctgaggattcataa
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