Bradysia coprophila: 119067288
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Entry
119067288 CDS
T08269
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bcoo04131
]
119067288
Membrane trafficking [BR:
bcoo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119067288
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119067288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WDR55
WD40
Beta-prop_WDR5
Beta-prop_HPS5
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Lgl_C
PEP5_VPS11_N
Synaptobrevin
Beta-prop_VPS8
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_like
Phage_Bbp19
Motif
Other DBs
NCBI-GeneID:
119067288
NCBI-ProteinID:
XP_037026067
LinkDB
All DBs
Position
X:complement(5425517..5650870)
Genome browser
AA seq
1390 aa
AA seq
DB search
MKKFTFKGVLDGFRSTVQPQTKPEQEIQETLRPEHFQLRKTFRHGFPHSPTALAYDPVQK
LLAIGDKSGSLRILGRPGVDTHIRHDGDSACAVTHIEFLVNEGALVTATADESLHLWNFR
QKAPQVVQSLKFNRERITYLHLPVASKWLYVGTEKGNIHVVHIESFALSGYIINWNKAIE
VLRKSHPGAVVTLADNPTDANKLLIAYECGQIVLWDLRSKCAEMRWQSGEPLRSVAWHHE
GKYFVSSHTDGSLCTWPLRPTPKPQFHSYPHAKTNKDGKLETCKPIHKVDLRTTRMGETF
TIFTGGLSMEKGGKSPCITVLQGKSTTVLEMEHPVVDFVTICESPWASDMQEPYAIAVLL
QNDLVLIDLLTPGFPCYESPYPMDLHESPVTCCTYLSDCPSDLVPAFYFVGRNPARKTGF
SDREWPISGGEWSPASCSYSEIIITGHQDGSIKFWDSSAGTLQVLYKLKTAKIFERPRTR
SLDGSDEDPLAVQIISLCAESRRLCVAGASGHVILFKFRKTESTAEFLALEIPIFYENFD
DGDASPECEFIPRSLPKPTDLGDNDKKNDCMLKVRPGPQRKAPGFQAQLICLTPWTNGTH
PGQITSLCINSSYGLMAYGNEHGLVIVDIIQKICLLNVASPDLYGAQDPYSRAPRSPKRV
DTINRDDQARSPSIDQLTELSSSPSKVASAMRPLSTEPNTSRPPSPANEAQENDDILTPE
EDEQYTAIAQCRRKSSSWSRFKLKRQLTKVNMMLTNTFSEAGSSGTNATTKRGSIFHHGP
TDGTPLSPVEVSPITTSHSTSSDTDRSDFVADIEKDIVQSIDELSVKKPITPESRDVTAN
NSDDAESEPSSLIDYQQQSHNPRSILQTVDMKPRKASQPQNLPSKKVDFSEETVVRSLAT
NCEGSRMSRPSDLPLFDENGQPILPPRGKKKDNRDKRLLSVPNIKFTRQESTKLKDLRAR
NEKDQGSSFAGNIMRRFSRVDKLDSSFSRSRSSSMSSLENISSESVTCLAFADSYTKKSD
PTTLLPTLWVGTSLGSVLTVSITLPDADLRKAQPVVVSILGGPIFRLKGSILSMSFLDCN
GALIPYSYEAWKDENRGGTPTKNTNRMSPTLSGASGSTDSFSDRQFIAITSEKQARVVAL
PSQNCVYRQQIADTDYVVKAEIISLKDSVCLICYISTGHLLGYSLPSLRPLMDDDFLPLA
DLSFQTKCKQGIVDPMLSIWGQQLIVHEDTNQISKTFCFSNRGHGLYLATPAEIQKFTVC
AEFCNFINEMIGELFIPHEMPEPPKESFFKGLFGGGSRNLDREELFGETSGKPNRGVAKH
IPGPNLQELGQRASSATSEISRAHQLAMERGDKLSQLEERTERMHNQAQEFSGTAHNLML
KYKDKKWYQL
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttacgttcaaaggcgtcctcgacggatttcgttcaaccgttcagccacaa
actaagcctgaacaagaaattcaggaaacattgcgacccgaacattttcaacttcgtaag
actttccggcatggatttcctcattctccaacagcgcttgcatatgatcctgtacagaaa
ctcttggcaatcggcgacaaatctggttccctcagaatacttggtcggcctggtgttgat
acacatattcggcacgacggcgattcagcatgtgccgttacacacatagaatttttggta
aatgaaggtgcattggttacggctaccgcagatgaatcattgcacttatggaattttcga
caaaaagcgccacaagtagtacaaagtttaaaatttaatagagaacgaataacatacctt
catcttccggtggctagtaaatggctctacgttggtacagagaagggaaacattcatgtt
gtacatattgaatcgtttgcacttagcggatacatcataaattggaataaagcaattgaa
gtattaagaaaaagtcatcctggtgctgttgttacgttagcagataatcctaccgatgca
aataagttgctcattgcctacgaatgcggccaaatcgtactatgggatctacgttccaaa
tgtgcagaaatgcgatggcaatctggtgaaccactccgttcagttgcatggcatcacgaa
ggaaaatattttgtttcatcgcacaccgacggatcgttgtgtacatggcctttacgaccg
acgccgaaacctcagtttcattcgtatcctcacgctaaaaccaacaaagacggaaaatta
gagacatgcaaaccaattcacaaagtggatttaagaacgacaagaatgggagaaacattt
acaatattcacgggtggcctctcaatggaaaagggaggtaaatcgccatgtatcacagtg
cttcaagggaaatcaacaacggtactggaaatggagcatccggttgttgattttgttaca
atatgtgaaagtccttgggctagtgatatgcaagaaccttatgccattgctgtactgtta
caaaatgacttagttttaatagatttattaacgcccggatttccctgttacgaatcgcct
tatccaatggacctacacgaatcaccagttacatgttgcacttatttatccgattgtcca
tccgatttagttccagcattttatttcgttggtcgaaatccggcacggaaaacgggtttt
tccgatcgtgaatggccaatatctggaggtgaatggtcgcctgcatcgtgtagttattcg
gaaataattataactggtcatcaagatggttcaataaaattctgggatagcagtgctggt
acactgcaagttttgtacaaattgaaaaccgccaaaatatttgaaaggccgcgaactcgg
tctttggatggatccgatgaagatcctttagccgttcaaataatatccttatgcgctgaa
tcgcgacgattatgtgtagctggtgccagtggtcatgtgatactatttaagtttaggaaa
acagaaagcacagctgaatttttggctttagaaattccaattttttatgaaaattttgat
gacggagacgctagtccagaatgcgaattcattcctaggtctttaccgaaaccaaccgat
ttaggcgacaatgataaaaagaatgattgcatgctgaaagtgcgacctggaccacaacgt
aaagcacccggttttcaagcacaattgatttgtttgacaccgtggacaaatggtactcat
cctggtcaaataacttcgctttgtataaattctagttatggacttatggcctatggtaac
gaacatggcttagttattgtcgatataattcaaaaaatatgtcttctgaatgtggcgagt
ccggatttgtatggtgcacaagatccgtactcccgggcgcctcgcagtccaaaacgtgtc
gatacaataaatcgggatgatcaggcccgatcacccagtatagatcagttaactgaacta
tcgagtagtccatccaaagtagccagtgctatgcgcccactcagtaccgaaccaaatact
tctcgaccaccatctccggcgaatgaagcgcaagaaaacgacgatatcttaactcctgaa
gaagacgaacaatacacagcaatagctcaatgtcgtagaaaatcatcgtcgtggagtcga
ttcaagttgaagcgtcaactaactaaagtcaacatgatgctgacaaatactttttccgaa
gctggttcgtcgggtactaatgcaacgacgaaacggggatcaatttttcatcatggtccc
accgatgggactcctttgtcgccggtcgaagtatcgccaatcactacgtcccattcgacg
tcgtccgacactgatcgttcagattttgtagccgacatagaaaaggatattgtccaaagc
atcgacgaattgagtgttaaaaaaccaattacacccgaaagtcgcgatgttaccgctaat
aattccgatgatgccgaatcggaaccgtccagtttaattgactatcaacagcaatctcac
aatccacgcagcatactgcaaacggtcgatatgaaaccacgaaaagcctctcaaccgcaa
aatcttccatcgaaaaaagtcgatttctccgaagagaccgtcgttcgatcattagctacc
aattgtgagggatctcgaatgtccagaccgtccgatttgccgctgttcgatgaaaacggt
caaccgatccttccgccacgcggaaagaaaaaggataatcgcgataaacgtttgctgtcg
gtgccgaatattaaatttacgcgtcaagaatccaccaaattgaaagatcttcgggctcgc
aacgaaaaggaccaaggatcatcgtttgctgggaatataatgcgacgattcagccgagta
gataagttggatagttcgttttctcgttcacgatcatcgtcgatgtctagtctagagaat
atctcgtctgaatcagtgacttgtctagcattcgctgatagttacacgaaaaagagcgat
ccgacgactttgctaccaacattatgggtgggaacaagtttaggctcagtattaacagtg
tcgattaccttgccggatgctgatttacgaaaagctcaaccggtcgttgtgtcgatatta
ggtggaccaatatttcgtctgaagggttccattttgtcaatgtcctttctcgattgtaat
ggtgcccttattccatattcgtatgaagcgtggaaagatgaaaatcgtggtggcactccg
actaaaaatacgaaccgtatgagtcctactttaagcggagctagtggcagcacagattcg
ttcagcgaccgtcaattcatcgcaataacgagtgaaaagcaagctcgagttgtagcgttg
cctagtcaaaattgtgtgtaccgacaacaaattgccgatacggactatgttgtaaaggct
gagattattagtttaaaggatagcgtttgtcttatttgttacatttcaactggtcaccta
ttaggctacagtttaccgagtttgcgaccgctgatggatgacgacttcttaccgcttgct
gatttgagctttcagacaaaatgtaagcaaggaattgtagatccaatgctatctatttgg
ggtcagcaactaattgtgcacgaggatactaatcaaatttccaaaacgttttgctttagc
aatcgaggtcatggtttatatttagctacaccagctgagatacagaaatttactgtttgt
gcagagttttgcaattttataaacgaaatgattggcgagttatttattccgcacgaaatg
cctgaaccgccgaaagaaagtttcttcaaaggattgtttggtggcggatctcgaaatcta
gaccgtgaagaattatttggcgaaactagtggcaaaccgaatcgcggagtcgccaaacat
atacccggtccaaatctacaggagctcggccagcgtgccagttcggccacatcggaaatt
agccgtgcccatcaactggccatggagcgtggcgataaattgagtcaattggaagaacgt
accgaacgtatgcataatcaagctcaagagtttagtggaacggcgcataatctgatgcta
aaatacaaggataagaaatggtatcagctctag
DBGET
integrated database retrieval system