Bradysia coprophila: 119067354
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Entry
119067354 CDS
T08269
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03020
RNA polymerase
bcoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119067354
09124 Replication and repair
03420 Nucleotide excision repair
119067354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119067354
03400 DNA repair and recombination proteins [BR:
bcoo03400
]
119067354
Enzymes [BR:
bcoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119067354
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119067354
DNA repair and recombination proteins [BR:
bcoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119067354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119067354
NCBI-ProteinID:
XP_037026158
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Position
X
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AA seq
1174 aa
AA seq
DB search
MYNDEDNFEEEDAEDISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVED
SPAIDLQAEAQHTSGEIETPPRFLLKFDQIYLSKPTHWEKDGSPSPMMPNEARLRNLTYS
APLYVDITKTKIVEGQEPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLDP
GGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWVNMMA
RGGQSLKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKK
AYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQK
FIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSH
LRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSPI
LEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSEV
SMIRDIRDREIRIYTDAGRICRPLLIVENSNLLLKKTHIEMLKERDYNNYGWQVLVASGV
VEYIDTLEEETVMIAMSPYDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSIV
AILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRIGDQEEQFEKPNRQTCQGM
RNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDGTTKRFSKRDASTFLRNSE
TGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRHEDMPFTCEG
LTPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYGY
HLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKGC
KNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatgatgaagacaatttcgaagaggaagatgcggaagatatttctcacgaattg
tggcaagaagcttgttggattgttataaacgcatatttcgatgaaaaaggtcttgtgcgt
cagcagttggacagtttcgatgaattcatacagatgtccgtccagcgtattgttgaagat
tctccggccattgatttacaggcagaggctcaacatacgtcgggagaaattgaaacgccg
cctcggttcctgctgaaattcgatcaaatctacttatcaaaaccgacacattgggaaaaa
gatggttcacccagtccaatgatgccgaatgaagcccgtctgcgtaaccttacatattca
gcaccactctatgtggatatcaccaaaacgaaaattgtggaaggacaagaaccagtggaa
acccagcatcaaaagacgttcataggcaaaattccgatcatgttgagatcgacctactgt
ctgctgagccagttgaccgatcgtgatttgactgaattgaacgaatgtcccctggatccg
ggcggttatttcattatcaacggatcggagaaggtgctgatcgcccaggagaaaatggct
acgaacacagtgtatgtgttcagtatgaaagacggtaaatacgcgtacaagtccgaaatt
cgatcgtgtttggaacatagttctcggcccacatccacattatgggtgaatatgatggct
cgtggtggacaaagtttgaaaaagtcagccatcggtcaacgaatcatcgctatattgccg
tacattaaacaggaaattcccatcatgattgtattccgtgcgctcggtttcgttgccgat
cgtgacatcctcgagcatattatttacgatttcgacgatccggaaatgatggaaatggtc
aaaccgtcactggacgaagcctttgtggtacaggaacaaaatgttgcgctgaatttcatt
ggtgccagaggtgcccgtcccggtgtcaccaaagacaaacgtatcaaatatgccaaagaa
attctgcaaaaggaaatgttgcctcatgttggcgtttccgatttctgtgaaacgaagaag
gcctacttcttgggctatatggtgcaccgactgctgttagcggctctcggtcgacgtgaa
cttgacgatcgtgatcactacggcaataagcgattggatttagctggaccattgctggcg
ttcttgttccgtggattgtttaagaatctgatgaaggaggtccggatgtatgcccaaaag
ttcatcgaccgtggaaaggatttcaatttggaactggcaatcaaaacgaaaatcattacc
gacggactgcgatattcgttggctacgggtaattggggcgatcaaaagaaagctcatcaa
gcgagagccggtgtgtcgcaggtattgaatagattgacgttcgcatcaacattatcgcat
ttacgacgtgtaaattcaccgattggtcgcgatggtaaactggccaaaccacgtcaatta
cacaacacattgtggggcatgatatgtccagccgaaacgccagaaggagcagccgtaggt
ctggtgaaaaatctcgcactgatggcgtacatttccgtcgggtctcaaccgtctccaatt
ctggagttcttggaagaatggtccatggaaaatttggaagaaattgctccatctgccatt
gctgatgcaacgaaaatcttcgtaaatggttgctgggtgggcatacatcgagatcccgaa
caattgatggccacattacggaaattgagacgtcagatggacatcatcgtttcggaagtg
tccatgattcgggacattcgagacagagaaattcggatatacaccgatgctggacgcatt
tgtcggccgttgttgattgtggaaaatagcaatttgctgctgaagaaaactcacatcgaa
atgttaaaggagcgtgactacaacaattacggttggcaggtattagtggcgtccggtgtt
gtggagtacattgatacattggaggaagaaactgtcatgattgcaatgtccccgtatgat
ttgaaacaggacaaagagtatgcctactgtaccacctatacgcactgtgaaatccatccg
gctatgatcctgggcgtttgtgcgtccatcattccatttcccgatcacaatcaaagtccg
cgtaacacctaccaaagtgctatgggtaaacaagccatgggtgtttacattaccaatttc
cacgttcggatggacacactagcccacgttttgtattatccgatgaaaccgttggtgaca
accagatccatggaatatcttcgattcagagagttgcctgctggtatcaattcaatcgtt
gctattctttgctacacgggatacaatcaggaagacagtgtcatcttaaacgcgtcggct
gttgagcgaggtttcttccggtcggtgttctaccgatcgtacaaagatgcagagaataaa
cgaatcggtgaccaggaggagcaattcgaaaaaccgaatcgacagacgtgccagggaatg
cgaaacgcgttgtatgacaaattggacgatgatggaatcattgcgcccggcattcgtgtg
tccggcgacgatgtggtcattggaaaaacaatcacactgccggagaacgacgatgagctc
gatggaacgaccaaacgattttcgaaacgagatgcatcgacattcctgcgtaattccgaa
actggtatcgtcgatcaggtcatgttgacgctaaacagtgaaggctacaaattttgtaag
attcgagttcgttcggtgcgtataccacaaattggcgataagtttgcgtcacggcacgga
cagaagggtacttgcggtattcagtatcgtcacgaggacatgccgttcacgtgtgagggc
ttaacgccggatattatcatcaatcctcatgctattccgtctcggatgacaattggccat
ttaattgaatgcttgcaaggtaaactcggttcaaataagggcgaaattggtgatgccaca
ccattcaacgatgccgtaaacgtgcaaaaaatctcaacattcttgcaagagtacggctac
catttgcgtggcaatgaagtgatgtacaacggacacaccggtcgcaaaatcaacgctcaa
gtgttcttgggtccgacatactatcaacgtttgaaacacatggtcgacgacaaaattcat
tcgcgtgcccgtggaccggtacaaattctggtccgacagcctatggagggcagagctcgt
gacggcggtctacgtttcggtgaaatggaacgtgattgtcaaatttcccacggagccgct
caatttctgcgcgaacgtttgttcgaagtttccgatccgtatcgcgtgcacatctgcaac
ttttgcggtttgattgccatcgccaatttgcggaacaacacgttcgagtgcaaaggatgc
aagaataagacgcagatttcccaagtaagacttccgtatgctgccaaactgttgttccaa
gagctgatgtcaatgaacattgcaccgcggcttatggttgtgtga
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integrated database retrieval system
