Bradysia coprophila: 119067436
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Entry
119067436 CDS
T08269
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119067436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119067436
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119067436
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119067436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
119067436
NCBI-ProteinID:
XP_037026305
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Position
X
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AA seq
213 aa
AA seq
DB search
METDSSPVTETKHLMCVPGQRLCLCEENTIPGQGTYERQGYIYSMLAGLVQIRQKDKMKV
LEVKSFGNQTIVPIAGDIVTAKVTVLNQRIAKCLITCVGDVTLNRTYRGLLRKEDVRSTE
KDRVDMYKSFRPGDVILARVLPHTELHCYQLSTAENELGVVVAMAAESGLHGVPMIPVSW
TEMQCPQSLVKEQRKVAKIVSESAVNIKTEPKP
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagatagttcgcctgttactgagaccaagcatctgatgtgtgtccccggacaa
agactctgcctgtgtgaagaaaatacaatccccggtcaaggtacatacgaacgacaggga
tacatctactcaatgctggccggattggtacaaattcgacagaaagataagatgaaagta
ctcgaagtcaaatcgttcggaaatcaaaccattgttccgattgccggtgatattgtaaca
gccaaagtaaccgttttgaatcagcgaatagccaaatgtctgattacttgtgtgggcgat
gtaacgttgaatcggacgtaccgcggcttattgcggaaagaagatgttcgaagcacagaa
aaggatcgtgtcgacatgtacaaatcattccgaccgggcgatgtcattctggcccgtgtg
ttaccgcacaccgaactacattgctaccagttgagcactgccgaaaacgaactcggagtt
gttgtggcaatggctgctgaatctggtctgcatggtgtgccaatgattccagtaagttgg
acagaaatgcaatgcccacaaagtttggttaaggaacagcggaaggttgcaaaaattgtg
tcagaaagtgccgtcaatatcaaaaccgaaccaaaaccgtag
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