Bradysia coprophila: 119067669
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Entry
119067669 CDS
T08269
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03013
Nucleocytoplasmic transport
bcoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119067669
03015 mRNA surveillance pathway
119067669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119067669
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119067669
mRNA cycle factors
P-body specific factors
119067669
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
119067669
NCBI-ProteinID:
XP_037026670
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Position
X
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AA seq
1136 aa
AA seq
DB search
MENPEPVSVENVESEEQIELRERDELTTYTTDLLARIQSKSNLRQENLTCNRPSEEYFVR
LDSSLKKNTAFVKRLKQFTAGQLDGFVKDMSGLNLTKYISEVSSSLVEAKLKMTDVAAAI
TLCSKLHQVYADFSVAFFENWSKILAIKPGEKLANSSKTRVDLRFFAELISVGVFSNKMG
LPLLGSTLTYLIQSDKEDHANLSIILSFCRHCGEEYAGLVNRTIHTLAKKYNVELPAFAL
LTSDKQQNLRNLLKDYYYTLCKHLYSEHKSYQQTVRTNRNILASKGEVSNERKEKLELMQ
SNFEKLSVSVQAMAELLNESMPELPKDEEDPIKGMVLENDDLMESQLDPWGDEETKSFYI
DLPDLRIFLPNYAPKQAPTQPAEPAMTEETLDMDIEPELLQVDVSELPNIEEASNVASSE
PIVEESAAPASTTGVVHGTRQQFEVFLSNLVNCVNKELIDSAAIEFLLNLNTKNNRKKLA
NALFGVQRTRLDILPFFARLVATINLVSTDVSTELCQKLKNEFKYHINKKNQMTIESKIK
VVRYIGEMVKFGLYSKIEALFCLKVLLLDFQHHQIEMTCAFLEVAGQYLYNSKDSRLRTN
VYLEQMMRLKTATALDSRHVAQIENSYYLVKPPEGQNTVQKIRPPMNQYIRHLIFKDLNK
SNVDKVIKIMRRLNWDDKEINAYTIKCLSKAYNVRYHLIRCLADLVSGISSYQDKAMVKV
IDTVFEDIRAGLEIHSPKLAQRRIAMAKYLGELYNYRLVESSNILNTLYSIISLGVTLDA
QVVSELDPPDSLFRLKLACVLLDTCGQYFTSPVSRKRLDYFLIFFQQYYWFKKSHPIFST
IEDTSNLFPILVDHTYKECLSNVRPKLKLFKSYEQAKEAVEKLRLQLYPTLFQSPGKDGG
GDLGDVNSLEPIVEDAELSNELTEDTTSEAVGESDDAVRGENENDDEDDDDDDDDSVERT
ESPEVLPKEKERTQEDVEFEQAFEKLAIDSYQERLRDTIKPSTKDIPVPIMAKSGGKKTY
DQLQANEPLPSETSVPFVLMLRGAKGGKQQFKTFTAAVDSQLAINLRLQEEQIREEKEKV
KRLTLNITERIEEEDYQISLLQSQRTAAEQRSNQKTNSKQKYKHQKGAPDADLIFS
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccggaaccggtcagcgttgaaaatgttgaaagcgaagaacaaattgagtta
cgcgaacgtgatgaactaacgacatacacaaccgatttattggcaagaattcaaagcaaa
tcaaatttgcgtcaagagaatctaacatgcaatcgtccatcggaagagtactttgtccga
ttggattccagtctcaaaaagaatacggcttttgtcaagcgattgaaacaatttacagct
ggtcaactggacggattcgtcaaggatatgtccggattgaatttaacgaaatacatttcc
gaagttagttcgtcattggttgaagcgaaattgaaaatgactgatgttgctgccgctata
acactttgttccaaattacaccaagtctacgcggacttttcggttgcgttcttcgagaat
tggtcgaaaattctggcaattaaaccgggagagaaattggccaattcaagtaaaaccaga
gttgatttgagattttttgcggagttgatatcggtcggtgttttcagcaataaaatgggt
ctgcctctactcggatcgacattgacctatctcattcaatcggataaagaagatcatgca
aatctgtcgattatcttatcattttgccgccactgtggagaggaatatgccggtttagtc
aatcgaaccattcatacattagccaagaaatacaatgtggaactaccagcgttcgctctc
ttgacatccgacaaacagcagaatcttcgcaacttgctgaaagactactactatacgctg
tgcaaacatctctattcggagcacaaatcgtatcagcaaacggttcgcaccaatcgcaac
attttggcttcgaaaggagaagtgtccaacgaacgcaaagagaaactggaattgatgcag
agcaatttcgagaaattgtcggtgtcggtacaagcaatggccgaactgctgaacgaaagt
atgcccgagttgccaaaggatgaagaagatccgatcaagggaatggtattggagaatgat
gatttgatggaatctcaactcgatccatggggcgatgaagaaacgaaaagtttctacatc
gatctgcctgatctgcgcatttttctaccaaattatgcgccgaagcaagcacccactcaa
cccgccgaacctgctatgactgaagagacgttagacatggacattgaaccggaattattg
caggtggacgtcagcgagctgcccaatatagaagaggccagcaatgtggctagttccgaa
ccgattgtggaagagtcagcggctcctgcatccactacaggtgtcgtacacggcaccaga
caacaattcgaagtattcttatcgaatttagtcaattgtgtcaacaaggagttgatcgat
tcggctgctattgagtttctgctgaatctgaatacgaaaaacaatcgaaagaagctggcc
aatgcgttgttcggcgtgcaaagaacacgattggatattctgccatttttcgcccgactc
gtcgcaaccatcaatcttgtgtcgacggatgtgtctacagaattgtgccagaaattgaag
aacgagttcaagtaccacatcaacaagaagaaccaaatgaccatcgagtcgaagatcaaa
gtggttcggtacatcggcgaaatggtgaaatttggcctgtactcgaaaatcgaagctctg
ttctgtctgaaggtgctgctgctcgacttccaacatcaccaaatcgaaatgacctgcgcc
ttcctggaagtggccggccaatatttgtacaattcaaaggacagccgactgcgcacgaat
gtctatctggaacagatgatgcgtttgaaaacggcaaccgcattggattcacgccatgtg
gcccaaatcgaaaattcctattatttggtcaagccaccggagggtcaaaataccgtgcag
aagattcggccgccaatgaatcagtacatccggcacttgatattcaaagacttgaacaaa
tcgaacgtggacaaagtgattaaaattatgcgccggctgaactgggacgacaaagagatc
aacgcgtacaccatcaaatgtctgtcgaaggcgtacaatgtgcgctaccatttgatcaga
tgcttggcggacctggtgtccggcatcagttcgtatcaagacaaagcgatggtgaaagtg
attgacaccgtttttgaggacattcgagccggactggaaattcattcgccgaaattggca
cagaggcgcatcgcaatggccaagtacttgggcgaattgtacaattatcgcttggttgaa
tcgtccaatatcctgaacacgttatactcaatcatttcgctgggagttacgctggatgca
caagtggtatccgaattggatccaccagatagtctgttccggctaaagttggcgtgtgtg
ttactggacacctgtggacagtatttcacaagcccagttagtcgtaagaggttggactac
ttcctgatattcttccagcaatactactggttcaagaagagtcacccgatatttagcacc
attgaggatacgtcgaatctgtttccgatattagtcgatcatacgtacaaagaatgtctg
tcaaatgttcgaccgaaactgaagctattcaaatcgtacgaacaagcgaaagaagcggtg
gaaaagttacgattgcaattgtatccgactttgttccaatcgcccggcaaggatggtggt
ggtgatttgggtgatgttaacagtttagagccgatcgttgaggatgctgaactgtccaat
gagctgaccgaagacactacgtccgaagctgtcggcgaatcggatgatgctgtacgtggc
gaaaatgaaaatgatgatgaggacgacgacgatgatgatgatgactcggttgaacggacg
gaatcgcccgaagtattaccgaaggaaaaggagcgaactcaagaggacgttgaatttgag
caggcattcgaaaagctagcaatcgacagctaccaggaacgactgcgtgataccattaaa
ccgagtacaaaagacattccagtgccaattatggccaaaagtggcggcaagaaaacatac
gaccaactgcaggcaaacgaaccattaccgtcagagacgtctgtgccattcgttctgatg
cttcgcggtgctaagggcggcaaacagcagttcaaaacattcacagccgctgttgacagt
cagctggcaatcaatttacggctgcaggaggagcaaattcgcgaagaaaaggagaaagtg
aagcggctcacgctgaacataaccgaacgaattgaggaagaggactaccaaatatcattg
ctacagagtcaacgaacggcggcggaacagcggagcaatcagaaaacgaactcaaaacaa
aagtacaaacatcagaagggggcacccgatgccgatctaatatttagttga
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