Bradysia coprophila: 119068053
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Entry
119068053 CDS
T08269
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03013
Nucleocytoplasmic transport
bcoo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119068053
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119068053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119068053
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119068053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
119068053
NCBI-ProteinID:
XP_037027340
LinkDB
All DBs
Position
X
Genome browser
AA seq
1678 aa
AA seq
DB search
MSENSIISAPTTPENANSSIHKAKSTVSNIILNTLSNSISKWFSPSDQNGNLRRKRETES
DIELNDMTHGTGASEPPTKRFRSGQNQDEAESQPTTSTRHLYSTRQISSSTPTTVTPTRR
KMLVRNSSPFNFSEQMPTDTRRQSQIEPTTITLDDNGDNSTDEEVTIHDDVTDSLSRELA
NRKRLNIPPTARPASRTSNLMSMSMRSSLTSRNRFSANHTIGNDATKDDDLEQDALFNGT
PNESASESEDSSSRITFTQPNRFATKRPQSSAGRINTSFVRDEEPDQNQRRLSGLFGTGS
KRLRGTNGLMNFSAHLQSNKSLFSDKNMPKSLNNSTTSLNSLNRRQSLNASLYGSTSALS
DSRLINTNSPFYSGRTMFGGASGYSRRAISSQPTLRVPTQIRPSSSLSTLYSSTNSLANV
DPNTSALSDTAKRILDLMNQCTTPLADVKKMASNTANHTPALVNHRKRFDDNDMMLNRSM
RLSTPKTPYSRPGANSARKSPPTNELQVPTMSQLLQMKKILQNNTEKVREVATASSSVLN
QTGEYKLPESNDVESASTRQSKIRNKITTTRASTKSNVQEEYVQEVNLPNISLPAMKSLP
DITLPFSKPITSTYNVPPATVTQPAPTLVNSTITKSVQPASPKVDNSTRTEKSQFSFASP
TQLKLPLFDKNIDPINNFKFSEPINVEKATNNSKPLPAFGTTVPSSGLFNVKTSAVDSGK
TVAPLKNASVLEALNLPKPANVASTPAAPASVTAVPPQKSLSDLFKSSSKQWECSCCMIK
NDNAKEICVACETPRSQASAAPKPIEQTLSAPLTNSFGSQFKTNANTWECSTCMIRNKLE
AQKCIACETPKSGGGLEKSVSALPKLAVPSTDQGFKSIVAQQSARWECSACMTRNDANRK
KCECCEQAKPGTSSESSIAFSFGSASSSTPKFSFGVPFNEKAASTVVPISEAKSKVDEPK
PSFSFGAQPNASVTDGPAKTFSFGSQSKEKDKEKKSDPPATTFSFGVKPTNKSNDNDLSA
SAKIASTPALSGFKFGASIPEVKPVTAVTAVIPSNKQTTEETAKETRSNELIIGSQNKNA
VISVPLPVVPVVPANLASTTNSTISFGSLKTDQKLPSFGAPISKVDSPASLMQTKPTFGL
TTTISSSNAQPSTANTSIVNTVTPASTVAPVFAFGQTQNAAKGGFSFAPKPVVSDKQAFP
MPDFAQSQVKPAATTTLSFGSSAATVTTAAPSAPFGNSFFFGQAATASTSENSTASSTFG
STTSTPATGFNFGSSSTPAQPVSTTFGTPQQPQLPSTPAFSAAATAITSSLPTEPATSPF
MFRSATNAEPMPAFGQSTTPSFGQTNTTPVTPFGSFGSQAATPAPAFSANVNPIGNPITN
NAASTTFGSSSPFGSTVNATQTPNFGIGNNGLSNSFGVPPSFGSPSSGFGSLIHPAPANS
DEPSAKKRSPGFGALSSANTQKPPAFSFGDSSSGSAPKSSFAFNATASPSFNFSGSQPAQ
TNSSQPYKFGSATAAPAPVFNFGSAETASSSIKFSSHPAASKNTRPSNNTAINSKHIWIR
NEDHNLNYNKNSKIHSAAISPNNTVQRKKQHNHFAIKYDPAFDKFHRSKYKIVNVKSASV
VANNNQCEQSNTELTHNVTTSPMVCAYDINKTNFNCNDTSKFKYVKNNNLMDVQSHDK
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaatagcattataagtgcaccaacaacgccagaaaatgctaattcatcgatc
cacaaagcgaaatccactgtctcaaacatcatattaaatacgctatccaattcaatatcg
aagtggttctcaccatccgatcaaaatggtaatttacgtcgaaagcgggaaactgaatct
gacatcgaactgaatgacatgacacatggtactggggcatcagaaccgccaacaaaacgt
tttcgcagcggacaaaatcaggacgaagctgaatcgcaaccaaccacttcaactagacat
ctttattcgactcggcagatttcgtcgtcgacaccaaccacagtaacgccaacacgacgg
aaaatgttagtaagaaattcgtcgccgtttaattttagtgaacaaatgccaaccgatacg
cggcggcaaagtcaaattgaaccaactacaatcacactcgacgataatggggataattca
acggacgaagaagtaacgattcatgatgacgtgaccgattcgttgtcacgagaattagca
aatcgcaaacgattaaacataccaccaacggctaggccagccagtcgaacatcgaacctc
atgtcgatgtcgatgcgatcaagtctcacatcacgaaatcgtttttcggccaaccatacc
attggtaatgatgcaacaaaagacgatgacttggaacaagatgcattgttcaatggaacg
ccaaatgagtcggcgtcggaaagtgaagacagttccagcagaatcacatttactcaacca
aatagatttgcaactaaacgaccgcagagtagtgccggtcgaatcaacacaagttttgta
cgcgacgaagagcctgatcagaatcaacgaagacttagcggtctctttggcacgggtagt
aagagactgagaggaaccaatggactaatgaatttttcagctcatcttcaatccaacaaa
tcgttgttttctgacaaaaatatgccgaaatccttgaacaactcgacaacatcattaaac
agtctgaatcgtcgccagtcgttgaatgcatcactgtacggcagtacgtcagccttgagc
gacagtcgattgatcaatacaaattcgcctttctacagtggcagaacaatgtttggcggt
gcatctggatactcgcgaagagccatttcaagtcaaccaacgttgcgtgttccaacgcaa
attcgaccgtcatcgagcttatcaacgttgtattcatcgacgaattcgttagcgaatgtg
gacccaaatacttctgccttatccgacacagccaaacgtattttagatttgatgaatcaa
tgcacaacaccattggccgacgtcaagaaaatggctagcaatacagccaatcatacaccg
gccttagtcaaccatcggaaacggtttgatgacaatgacatgatgttaaaccgcagcatg
cgactgtccacaccgaaaacaccatattcacggcctggtgcaaacagtgccagaaaatca
ccgccgacaaatgagttgcaagtaccgacaatgtcacaactcttgcaaatgaagaaaatt
ctgcagaacaatacggagaaggtccgtgaagtggctacagcatccagtagcgttttaaat
cagactggtgaatacaaactaccggaaagcaacgatgtggaaagtgcatcaacaagacag
tcgaaaatccgaaataaaataacgaccacaagagcaagcactaagtcaaatgtacaagag
gaatatgtgcaagaagtcaatttaccaaatatttccctgccagcgatgaaaagtttgccc
gacataactttgcctttttccaaaccgatcacatcaacttacaatgtgccgccagcaaca
gtaactcaaccggctccgacactagttaattcgacaattacgaaatctgtccaaccggca
tcgccaaaagtagacaattctactcgaacggaaaaaagtcaattcagcttcgcctcgccg
actcaactgaaactaccactattcgacaagaacatcgatccgatcaacaattttaaattc
agtgaaccaatcaatgttgagaaagccactaacaacagtaagccattgccggcattcgga
acgaccgtaccaagttctggtttatttaatgtgaaaaccagtgcagttgactccgggaaa
acagtggcgccgttgaaaaatgccagtgttttggaggcacttaacttaccgaaaccagcg
aatgttgcatcaaccccagcggcaccggcatctgtgacagcagtcccaccacagaaatca
ttgagcgatctgttcaaatcttccagcaagcaatgggaatgttcttgttgcatgatcaaa
aatgacaatgcaaaggaaatatgtgttgcttgtgaaacaccacgaagccaggcgtcagca
gcaccgaaacctatcgagcaaaccctatccgctccactaacgaattcatttggtagtcaa
tttaaaacgaatgcgaacacttgggagtgttctacgtgcatgattcgaaacaaattggaa
gcgcaaaagtgtattgcatgtgaaacgcctaagtcgggaggaggactggagaaatcagtt
tctgctttgccgaagctagcagttcctagcacagatcaaggatttaagtctatagttgct
caacagagtgcccgatgggaatgttcagcgtgtatgacccgcaacgatgcaaatagaaag
aaatgcgaatgctgcgaacaggcaaaacctggaactagttcggaatcatcaattgcattt
tcattcggcagcgcatcttcgtccacacccaagtttagctttggtgtgccattcaatgaa
aaagctgcatcaacagttgttccgatcagcgaggcgaaatcaaaagtggatgaacctaag
ccttcgttctcattcggtgcgcaaccaaacgccagtgttactgacgggccggcgaaaacc
ttctcgtttggaagccaaagcaaagaaaaagacaaagagaaaaagagtgatcctccagca
acaacattctcattcggcgttaaacctaccaacaaatcgaatgataatgatttgtccgcg
tcagcaaaaatagcttcaactccagcactgtctggatttaagtttggtgcgtcaatacca
gaagttaaaccggtaacagcagtaacggcagtgattcccagcaataaacagactacagaa
gaaacagctaaggaaacacggtcaaatgagttgataatcggttcacaaaacaaaaatgct
gtcatatcagtgccattgccagttgttcctgtagttcctgccaatttagcctctaccaca
aattcaactattagttttggatcgttaaaaactgatcaaaaattgccgtcattcggagca
ccgattagcaaagtcgattctccagcaagtcttatgcaaacaaaaccaacgttcggatta
acaacaacaatttcatcttctaatgcgcaaccgtcgacagcaaatacatcgatagtgaac
acagtaactcctgcaagtacggtcgctccagttttcgccttcggtcaaactcaaaatgct
gccaaaggtggattttcattcgcaccaaaaccggtcgttagcgataaacaggcatttccc
atgccagattttgctcaatcacaagtgaaaccggcagcaacaacgacactatcgtttggc
tcgtcagccgccactgttaccacagctgcaccttcagctccatttggtaattcattcttt
ttcggccaagctgcaactgcatcaacatcagagaattctactgcatcatcaactttcggt
tcaaccaccagtactccggcaactggtttcaatttcggttccagttcgacgccagctcaa
cctgtgtcaacgacttttggcactccacaacagccacaattaccatcaacgcctgctttt
tcggcagctgcaaccgctatcacctcatccttgccaacagaaccagctacctcgccgttc
atgtttcggtcagcaactaatgctgaaccaatgccagccttcggtcagtcaacaacgcca
agctttggtcaaacaaacacaacgccagtaactccgttcggaagttttggctctcaagca
gccactcctgctcctgcatttagtgctaatgtaaatccaataggcaatccaatcacaaat
aatgcagcctccacgacgtttggctcgtcatcgccattcggatcgacagtgaatgcaacg
caaacgccaaactttggtattggtaacaatggccttagtaactcgttcggagttccacct
agtttcggtagtccatcaagtggcttcggatccctgattcatccagcaccagccaattct
gacgagccgtcagccaagaagcgttcacccggtttcggagcattgagcagtgccaacaca
cagaagccgcccgcgttttccttcggagattcgtcgagcggtagcgcgccaaaaagttcg
ttcgcattcaacgcaactgcatcgccaagctttaacttctctggaagtcaaccggcacag
acaaactcatcacagccgtacaaatttggatccgctactgctgcgccagcacctgttttc
aatttcggttcggctgagaccgcaagcagtagcatcaaattcagcagccacccagcagcg
tcgaaaaatacgcgcccgtcgaacaacaccgcgataaactcaaaacacatttggattcga
aacgaagatcacaacctcaattacaataaaaatagtaaaatccattcagctgcaatcagt
cccaacaacaccgttcaacgcaaaaagcaacacaaccactttgccatcaaatacgatcca
gcattcgacaaattccatcgctccaaatacaaaattgttaatgttaaatcggccagtgtc
gttgctaataataatcaatgcgaacaatcgaatactgagttaacacataatgtcaccaca
tcgccgatggtatgcgcttatgatataaacaaaaccaattttaattgcaatgatacgtca
aagttcaagtacgttaaaaataataatttgatggatgtccagtcgcacgataaatag
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integrated database retrieval system
