Bradysia coprophila: 119068080
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Entry
119068080 CDS
T08269
Name
(RefSeq) transcription factor Sox-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcoo03000
]
119068080
Transcription factors [BR:
bcoo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119068080
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox_N
MATalpha_HMGbox
Nyv1_longin
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119068080
NCBI-ProteinID:
XP_037027382
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Position
X:complement(5329963..5405030)
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AA seq
505 aa
AA seq
DB search
MEENPIISLDGETADLNGNSSDGSMLNNNNKSNSKNILLSQAAGVVVGGVVRKEDEKITT
AVMKVLQGYQWSLVPTTTKSSSDRKKDHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELS
KSLGKLWKNLKEADKRPFIEFAEKLRVTHKQEHPDYKYQPRRKKTKSGNATRSTNSSNHS
QNRRLNSKYATNEYSSGNEILASPSGQSEDQNLIQSKIEQIDMKSYDYNSLHMLKSSCLN
TNYARADHSYPKGHKTDILSDSADSLRKYDYSRRMDSPCSPASSSNSGHSANEMHPLTPP
TTPYNLNNAMMRQGSPNSKQNLSPSTQFNLSRDSTFSSSIPDDVTYYRPDAYMSHSSNSK
LPSKYTPKYNVDPYSIYSHQLHQHYPMISSSTTSTPSPSSTAASYANSNLVNNFSSTNID
TDVDPKELEQYLDSSGQVKRLHPTTSYGYGMKPSDELVELQPISNELMVVEKVENVLPST
ISGSGMYYHENPYQYMHNWGCYPNS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatccaataattagtttggatggtgaaaccgctgatctaaatggaaatagc
agtgacggttcgatgctaaataataacaataaaagcaacagcaaaaatattctattgagt
caagcggcgggtgttgtcgtcggtggtgttgtgcggaaggaagatgaaaaaataacaact
gctgtaatgaaagttttgcaaggataccaatggagtttggtgccgacaacaacaaaatcg
tcatccgatagaaaaaaggatcacatcaaacgacccatgaacgcttttatggtttgggca
caggcagcgagacgagttatgtccaaacaatatccacatttgcagaactccgaattgagt
aaatcgctgggaaaactatggaaaaacctaaaagaagctgacaagcgtccgttcattgag
tttgccgaaaagttgcgggtgacccataagcaagagcatccagactacaaataccaaccg
cgtagaaagaaaactaagtcaggaaatgcaacacgctcaacaaattcctcaaatcattca
caaaatcgacggctcaatagtaaatacgctaccaacgaatacagttcgggaaatgaaatc
ttagcatcgccaagtggccaaagtgaggatcaaaatttaattcagtcgaaaattgagcaa
attgatatgaaaagctacgactataatagtcttcatatgctaaagtccagctgcttgaac
acaaattatgcacgtgctgatcattcctatccaaagggacataaaaccgatattctaagc
gattcagcggactcgctgcgaaaatacgactacagcagacgtatggactcaccatgctcc
ccggccagttcgagtaattccggccactcggcaaatgaaatgcatccgttgactccacca
accacaccgtacaacttaaacaacgcaatgatgcgccaaggatcaccaaatagtaaacag
aatttatcgccatccacccaattcaatttgtctcgtgacagcacattctcctcatcgatt
ccggacgacgtcacatactatcgacccgatgcatacatgtcccattcaagcaatagcaag
ctgccatcaaaatatacaccaaaatataacgtagatccgtacagcatctactcccatcaa
ttgcatcaacattatccgatgatatcttcgtcgacaaccagcacaccgtccccatcatcg
accgctgccagttatgccaattcaaatttagtgaacaattttagttcgacaaatatagac
acggacgtcgatccgaaagagctagaacagtatctggactcatcgggtcaagtcaaacga
ctacatcctaccactagttacggctacggcatgaaaccatcggatgaacttgttgaatta
cagccgatatccaatgaattgatggtggtggaaaaggtcgaaaatgttttgcctagcaca
atatcaggtagcggcatgtattatcacgaaaatccttatcagtatatgcataattggggc
tgctatccgaattcataa
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