Bradysia coprophila: 119068105
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Entry
119068105 CDS
T08269
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
bcoo
Bradysia coprophila
Pathway
bcoo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119068105
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
RA_2
PDZ_6
RA_3
Yop-YscD_cpl
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119068105
NCBI-ProteinID:
XP_037027426
LinkDB
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Position
X
Genome browser
AA seq
1963 aa
AA seq
DB search
MNFCTGRIKEFSPFNVVPMTMTSNEKRMLEREALRSVIQQWNANRLDLFELSEPDENLQF
HGVMRFYFQDHGQKVATKCIRVASDATVSDVIETLIEKFRPDMRMLSLPSYALYETHSNG
EDRKLNPDEKPLLVQLNWHIDDREGRFLLRDTMLNINALENPDINFKRKLSKREKKEQKK
KEKLAKLNSNPAADTENHVAEKLYNELPETSFTRSISNPEAVMRRRRQQILEKKLQQFRS
RDGGPDTGGTLKIYGESLCQDVPYKTLLLSIRDCAQAVVREMLAKYGLESSPLNYCLVQV
NSDGTEYILDDDECPLSILMNHPTSRGSIMFHVRRRPADSQPRRRKKKPLGVQNGSNNVT
VEREGPMLVEITHSGDGGRRVKLTAEPVEVGSANTNPLQLFGPSIQPRHCLISLHEGVCT
VTPLHADALTFVNGHHIQQPTILHNGSVVMFGRVASYRFVDSQSDGRFNLALSQSQLDSA
CLYESRTATSPSWHEEDRFISPAHNTMGTSQVQKPNYLESDTRSLSIDGAADHGKFGYTT
TATTTTNNNNQFAQSSLGHRNNNEPTTQSNDTNNKNLIVDDKQSEYEHDANTETETKSVS
SQKSDASNPEASRTSKMQPTEISGQEPILPAVLEFPETYQDAFLSQVISELDVNVPNFKL
APVYTLYLCARYRASTHYRPDLQPTERAHKLTIFLHNVANIIYSIVQEQYQDPKILSFWM
ANSSEFLHFLKSDRHISAFSVQAQEILTETVQNAFRNLVNCFRSELSQTLTQFLTEHIDH
DSAAGLVLTVLGSVMALLRRCRVNAALTIQLFSQLFHYINCICFNKIVTNPHMCIEHWGK
VISERLRILEVWALRQGLELAAECHLSKINQCADFLMASKSNVTEVQNLACRCFRLNSFQ
MAALLSQEKIPKNLVDTAIRMAESVADELARGDGREVTLEESTELPLALLIPEDGFSCDV
VRGIPPGLVDFVSPLQAAGMCRLAAQPTSIGLWTVYMHQYNQRSTSAMSSKHPQPEIQQI
KLHKNSNGMGLSIVAAKGAGQERLGIYIKSVVPGGAADADGYLQAGDQLLKVDGQSLIGI
TQERAADYLVRTGQVVTLEVAKQGAIYHGLATLLQQPSPVIQRGNRRVSERDMSRIGADM
KPPLPMHAHQLPNSKSTPALHHVGNQSMASNKSRSIHNLTGNVDHSFYQNLSACRAQNQS
QPNLGERSQIATSQSTINSPTTSTLTSMNQTTLNRPTSAYFSSNNTSNFMPSSQHQQPTQ
QNTMPYIISSQQQTQQQISKVDSLHQQQQQQQDLDQHQQQQQQQNGPIIPGNLSGQTMMM
NSRQTKANFHRDNQSRMNQIMAPSMPNIAHSSFASNISASQSMQNVNMINPYNPLGHSNL
MQQQINVATSHPHIYQQDFQLQSHLLQQQQLNQATLMRGKLNDMNEMLKRRNQRQQEMMP
MHSLDGSEQISPVKQLPPTAPKPQNLRQTQMFKEELSPPLPPTATHPLFTPTSSAGQNPA
MNQNLNAFGAAPQPQPQKQFHGSNPWEREEREKEQQLRRDQVRQWRDLQISELSGQQHRT
HSEDEQLKALVLERDFERRAQETDEQDDNNSFGKDNIVEVVRLSQGGGAHLPITTTLTTM
KQADIKSIVPNNDNSSEMSSFPNYPAQHHGNIQPKSILKHNSNRNEEANSSSPSSPSKQA
KSTSFAADDRLVSESSISHMARDLSNLSFNNYDSKDVNDQFDIISPPTQPARQITPPPPP
PERNSSYAVMSQKQQQTIRSSLGGPVQSSIEPQAHVTPPMQQTKILNYMNTKRTVGPSMT
STSNNNNNNQPNMPVGSVTQMSLSAMMANRDNKRVSFHDDDNNFIETNPMIPEEAELDII
RDSNRYIQESMDAMSPTTPESELWNSSMQPTPGVIGAQEVYRDPRTRRLREKQQQQQQRS
GEVPEKLSFKEKMKMFALESGENQTPKDKLKISRAQRDIDAVH
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctgcaccggtcgcatcaaggaattttctccgttcaatgtcgtcccaatgaca
atgacatcgaacgaaaaacgtatgctagaacgggaggcgttgcgttccgttattcagcaa
tggaatgcaaatcgtttggatttattcgaactatctgaacccgacgagaatctacaattt
cacggggtgatgagattctatttccaagatcatggtcaaaaagtcgcaacgaagtgcatt
cgtgtggcttctgatgctaccgtgtctgatgtcatagaaactctaattgaaaaattccgg
cccgatatgcgaatgttgtctttgcctagctacgctctgtacgaaacacattcgaatggt
gaagatcgtaaattgaatccggacgaaaagccattgctagtccaattgaattggcacata
gacgatcgagaaggacggttcttgttgcgcgacacaatgttgaacataaatgcgttggaa
aatccggacataaatttcaaacgaaaattgtcgaaacgcgagaaaaaggagcagaaaaag
aaggaaaaattagcaaaactaaattccaatccggccgccgatacagagaatcatgttgcc
gaaaaactctacaacgaattgccggaaacatcgttcactcggtccatatccaatccggaa
gcggttatgcgacgacggcgacagcaaattctggagaagaaactacaacaatttcgatcg
agagacggtggtcccgacactggtggaacgttaaagatctatggcgaaagtttgtgtcaa
gatgtaccttacaaaacattgctgttatcgattcgggattgtgctcaagcggtagttagg
gaaatgttagcaaaatacggtctggagagtagtccactcaattattgtttagttcaggtg
aacagtgacggcacagaatacattttagatgacgatgaatgccctctatcgatactaatg
aatcatccgacatccagaggttccatcatgttccacgtccggagacgcccggctgattca
cagccacggcgacgaaagaaaaaaccacttggcgtacagaacggcagcaataacgttacc
gtcgaacgagaaggaccaatgctggtggaaataacacacagtggagatgggggccgtcgc
gtgaaattgactgccgaaccggtggaggtcggatcagctaatacgaatccactacaacta
tttggaccatcaattcagccacgtcactgcttgatttcattgcacgagggcgtgtgtacg
gttactccactacatgccgatgcattaacttttgtcaatggacatcacatacagcagcca
acaatattgcataatggatcggttgtaatgttcggtcgagtagcatcttatcgatttgtc
gattcacaatcggatggccgattcaatttagcattgtcacagtcgcaactggattcggcc
tgtctgtacgagagccgaaccgcaacatcaccttcatggcacgaagaggatcgttttatt
agtccagcccataatactatgggcacatcacaagtccaaaagccaaattatttagaatct
gatacacggtcgctatcaatcgacggagcggccgatcacggaaaattcggttacaccacc
accgccaccacaaccaccaacaataacaatcaatttgcacaatcgtcactgggacaccgt
aataacaatgaaccgacaacacaatctaatgacaccaacaataaaaatctgattgtcgac
gataagcaatcggaatatgaacacgatgcaaatactgagaccgaaacgaaatcggtttcg
agccaaaagtctgatgcatcgaatcccgaagcaagcagaaccagcaaaatgcaaccaacc
gaaataagcggacaggagccgattttgccagctgtcctagaatttccagaaacttatcaa
gatgcattcctctcacaagtcatttctgaacttgacgttaatgtacctaattttaaatta
gctccagtctacacactctacttgtgtgccagatatcgagcatctacccactaccgtcca
gatttacaaccaactgaaagagcacataaattaactattttcttacacaatgtggccaac
ataatttatagcatcgttcaggaacagtaccaagatccgaaaatcctgtccttttggatg
gcaaacagttccgagtttttgcatttcctgaaatccgatcgacacatatcagcatttagt
gttcaagctcaagaaattttaaccgaaaccgtacaaaatgctttccgaaaccttgtcaat
tgttttcgttctgaattgtcgcaaacattgacgcaatttctaaccgaacatatcgatcat
gattcagcggctggattggtcctgaccgtcttgggatcggttatggcactgttgagacgt
tgccgagtaaatgcggctctgaccattcaattattctcgcaattgttccattacatcaat
tgcatttgttttaacaagatcgttacaaatcctcacatgtgcatcgaacattggggcaaa
gtaattagcgaaagattgcgcatcttagaagtgtgggccttgcgtcaaggattagagcta
gccgctgaatgtcacttatcaaaaatcaaccagtgtgcagactttttaatggcatccaag
tccaatgtgactgaagtgcaaaatttagcatgccgatgctttcgcctgaattcattccaa
atggccgctttattgtctcaagagaaaattccgaaaaatctggtcgacacagctattcgc
atggcagaatcagttgccgacgaattggcacgtggtgatggtcgagaggttacattagaa
gaatcgacggagttaccgttagctttactgataccagaagacggtttcagttgtgatgta
gtacgcggcattccaccaggacttgttgattttgttagtcctttacaagccgctggcatg
tgtcgattagcagctcaaccaacgagtattggattgtggacggtatacatgcaccaatat
aatcaacggtcaactagtgccatgtcaagtaaacatccacagccagaaatccaacaaata
aagttgcataaaaactcaaatggaatgggattgtcaattgttgcagccaaaggtgctggt
caggagcgtcttggaatttatattaaatcggtagtccctggaggagcggctgacgctgac
ggctatctacaagccggcgatcagctactcaaagtcgatggacaaagtttgattggaatc
actcaagagcgagccgccgactacttagttcgtacgggtcaagtagtgactttagaggta
gcaaaacaaggagctatttaccatggattagcaacgttgctccagcaaccgagcccagtt
attcagcgaggtaatcgtcgtgtatctgaacgagacatgtctcgaattggtgccgatatg
aaaccccccttgccaatgcatgcacaccaattaccaaatagcaaatcaacaccagcactt
catcatgtcggcaaccaaagcatggctagtaacaaatctcgaagcattcataatttgact
ggaaatgtggatcacagtttctatcaaaatctaagtgcatgtcgagctcaaaatcaaagt
caaccgaatctaggagaaagatcgcaaattgcaacttctcagtcgacaataaattcaccc
acaacttcaacattaacatcgatgaaccaaacaactctaaaccgtccaacttcagcctat
ttcagtagcaataatacgagtaatttcatgccttcttcacaacatcaacaaccaacacag
caaaatacgatgccttatataatttcctcgcaacaacaaactcagcaacagatttcgaaa
gtggattctctccaccaacaacagcaacaacaacaagatttagatcaacatcaacaacaa
caacaacaacaaaacggccccattataccgggaaatttgtccggtcaaacaatgatgatg
aacagtcggcagacgaaggcgaatttccatcgcgacaaccaatcgcgtatgaaccaaata
atggctccgtctatgccaaacatcgcccattccagttttgcatcgaacatatctgccagt
caaagtatgcagaatgtgaacatgatcaatccgtacaatccattgggccattccaatttg
atgcaacagcaaataaatgtggccacatcgcatccacacatctatcaacaagatttccag
ctccaatcgcatctgttacaacaacaacaattgaaccaagccactttgatgcgtggcaaa
ttaaacgatatgaatgaaatgctgaaacgacgcaatcaacgtcaacaggaaatgatgcca
atgcattcattggatggcagtgagcaaattagcccggtgaaacaactgccaccgacggca
ccaaaaccgcaaaaccttcgacaaacacaaatgttcaaagaggaactttcaccaccatta
ccaccaactgcaactcatccgttattcacaccgacatctagtgctggccaaaatccagct
atgaatcaaaatttgaacgcattcggtgcagctccccaacctcaaccgcaaaaacaattt
cacggatcaaatccgtgggaacgggaagagcgtgaaaaggagcagcaacttcgtcgagat
caggtgcgccaatggcgtgatttacagatcagtgaattgagtggtcaacagcaccgtaca
cacagtgaagacgaacaattgaaagctttagtcctagaacgtgattttgaacgacgtgct
caggagacggacgaacaggatgacaacaattcctttggaaaagataatatcgtcgaagtg
gttcgtttgtcgcagggtggtggtgctcatctaccaatcacaacaacactcaccacaatg
aagcaggccgatatcaagtctattgtaccaaataacgataacagctcggaaatgagctca
ttcccgaactatccagcccagcatcatggcaacattcaaccaaaaagcattttaaaacat
aatagcaatcgtaacgaggaagcaaactcaagcagtccatcctcaccatccaaacaagca
aaatcgacaagctttgcagccgatgatcgactggtcagcgaaagttcaatttctcatatg
gctcgtgatttgtcgaaccttagcttcaacaattacgattccaaggatgtaaacgatcaa
tttgacattataagtccaccgacacaaccggctcgtcaaataacaccacctccgccgcca
cccgaacgtaattcatcttacgccgttatgtcgcagaaacaacaacaaaccattcgaagc
agcctcggtggaccggttcagtcatcgatcgagccgcaagcacacgtcactccaccaatg
caacaaacaaaaattctcaattacatgaacaccaaacgaacggttggtccgtcaatgaca
tcgactagcaacaacaataacaacaaccagccgaatatgccagttggttcggtgacgcaa
atgtctttgtcggctatgatggccaatcgcgacaacaaacgagtatcattccatgacgat
gacaacaatttcatcgaaacgaatccaatgataccggaagaagccgaattggatatcatc
cgcgattcgaatcgttacatacaagagtcaatggatgcaatgtctccgacaactcctgaa
agtgagttatggaattcgtcaatgcaaccaactccgggcgtgattggagcacaagaagtt
tacagagatccacggacaagacgacttcgcgaaaagcaacaacaacagcaacaacgttcc
ggcgaggttcccgaaaagctatcgttcaaggaaaaaatgaaaatgtttgccttggaatcg
ggtgaaaatcaaactcccaaagataaattgaaaatttccagagcgcagcgagacattgat
gctgtccattga
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