Bradysia coprophila: 119068424
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Entry
119068424 CDS
T08269
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119068424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119068424
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119068424
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
EF_HD
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
119068424
NCBI-ProteinID:
XP_037027888
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Position
X
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AA seq
633 aa
AA seq
DB search
MKMTDTDSKTTCISEHDRALTVNALEEFNNNNYGTCIQNLVELESSIGVDPCIIHNKAVA
EFYKSDFKNYEQFHKVLNQLIGKAADSNNYEFENVKMATVYFNKAVLLFQMRQHQAALKI
MFAVMKHIDKLDDKVVQRAGLLTVNLLLNTNQPKKADALVELLQTRLNISSESLTSDEDD
DSDVSRDKKKEKSVKSLDYFKWMFRLYKTRSNVLNGKNLLIPNEDTSEISILRGHQYYNG
IDYQMAAKELSKNFTNLQSNIKKNGEDHNTVIANNMGIIHFHVRHYAMAARFFQHSLTFD
QTAMESVGDSPPLQSLGATKRPEILYNLGIAMLHLQRPKEAFECLLIPLNYYHNNPRLWL
RLADACIMVHTQNLKDKENKNIVSAVVGSGSHRKYIIQRTSMKYVSDESQSFAIPSTNLE
FASLCLRNTITLIDHHCNEIKKTPSTAANTDWTQIDERNQCNPSKPLNMNTINKLKCAAL
CKFSYVQLCLGEYLLALKSAKELLQLTYLPDVHAMLGHMYSAEALVMLDRITEARTYLEP
KFIAELKEDDFIHRGSPDWNINTKDAAQSILKYNLAVTLVLQGEIELAKSMMSTCKHPIV
YGHLKMLKMYMELQSGNVENCRKMVKIDTPQHS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgactgatacggactcgaaaacaacatgcatttcggagcacgatcgtgcgttg
acggtgaatgcattggaagaatttaataacaataactatgggacatgcattcagaatctt
gtcgaattggagtcgtcgatcggtgtggatccgtgcatcattcacaacaaagcggtggca
gaattctataaaagcgacttcaagaactacgaacagttccacaaggttctcaatcaactg
attggaaaggctgccgactcaaacaattatgaatttgaaaatgttaaaatggcaactgtt
tacttcaacaaggcagttcttctattccaaatgcgacagcaccaggccgccctgaagata
atgtttgctgtgatgaagcacattgataaactcgatgataaagtcgttcagagggctggt
cttttaacggtcaatttattgctgaacacaaatcagccgaagaaagctgatgcattggtg
gaactgttgcaaactcgtttgaatatttcctccgaatcattgaccagcgacgaggatgat
gacagcgacgtaagccgagataagaagaaagagaaatcggtaaagtcgctggattatttc
aagtggatgtttcggctgtacaaaactcgttcgaatgtgttgaacggtaagaatctgttg
attccgaacgaggacacatcggaaatatcaattttacgcggtcatcagtactacaatgga
atcgactatcagatggccgctaaggaactgtcgaaaaacttcacaaatcttcagtcaaac
atcaagaaaaatggggaggatcacaacacggtcattgccaacaatatgggaatcattcac
tttcatgttcgtcactatgctatggctgcccgattctttcaacattcgttaacatttgat
cagacggccatggagagtgtcggcgactcaccgcctttgcaaagtttaggtgcaacaaag
cgaccggaaattttgtacaatttgggtatcgctatgttgcatctccagaggccgaaggaa
gcctttgagtgtctgctaattcctctgaattactatcacaacaatcccagactatggctg
cgtttggccgatgcttgtattatggtgcacactcaaaatttgaaggacaaggagaacaaa
aacattgtatcggctgtggttggttccggatctcatcgaaagtacatcatacagcgaact
tcaatgaaatatgtgtcggacgaaagtcaatctttcgctataccaagtacgaatttggaa
tttgcttctctatgtttacgcaacacaattacgctaatcgatcaccattgcaacgaaatc
aagaaaacgccatcgactgcagccaatactgactggacccaaatcgatgaacgaaatcaa
tgcaatccatcgaaaccgttaaatatgaacaccatcaataaactgaagtgtgcggcgttg
tgtaagttcagttatgttcagctatgcctcggtgaatatttgctggccctaaagtctgca
aaggaattgcttcaattgacatacctaccggatgttcatgcaatgttgggacacatgtat
tcagctgaagcgcttgtcatgctggacagaataacagaagctagaacatacctagagccg
aaattcattgccgaattgaaagaggacgatttcatacaccgtggatcgcctgattggaat
ataaatacgaaagacgctgcccagtcaattttgaagtacaatttggccgtgacgctggtt
cttcaaggggaaattgaattagctaaaagtatgatgagcacatgcaaacatccaatcgtg
tacggtcacttgaaaatgctgaagatgtacatggaattgcagtcgggcaatgttgagaat
tgtcggaaaatggttaaaatcgatacgccacaacacagttga
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