Bradysia coprophila: 119068615
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Entry
119068615 CDS
T08269
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcoo03009
]
119068615
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119068615
Ribosome biogenesis [BR:
bcoo03009
]
Eukaryotic type
90S particles
Helicases
119068615
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Ig_SMCHD1_6th
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
119068615
NCBI-ProteinID:
XP_037028170
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All DBs
Position
X:4877945..4880486
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AA seq
584 aa
AA seq
DB search
MDAKELFKQLSCGAIFTKPIASKSYGQSTVTSSYIKKEIKDEEPSVDSDVSIKSEDESDN
EGQSTQIQILSDSAMPVQVSKKKKKVTAEQLKNWETEKVNHLRNKYHIHVKGSNPPDPLE
TFDEMKTKYSIDSQVFDNLFGCGYNVPTPIQMQAIPVMASGRSLMACAQTGSGKTSAFLL
PIIRDLKKPKKRGFRAVILCPTRELAKQTQRECLRLVDGLGLRVHILSKVNQAESRYGDK
SNKKFDILITTPNRVCYLLNQKPVVLDLKSVKWLILDEADKLFEEGKNGFREQFDQIYKE
CSRPSIKVGLFSATWTNAVAKWCRKNLKGFLTITIGQRNAATDLVEQELVFVGSEAGKLL
AFREMLRKGLQPPVLVFVDSKDRAQQLYKELMFDGINIDVIHSDRSQQERDNVVKDFREG
KVWVLVCTEIIGRGIDFKGVNLVVNYDFPQSAISYIHRIGRTGRAGRRGRAITYWTQNDT
INLKSIAKVIKNSGCPVPEYMLTMKEHSKKTKKKLKKTVPEREDISVKHAARKHVKTNKF
DKKKVNGKPIQNGKVGKAKSKTKFKKTMKAEGKKMSVKRAADGK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggacgctaaggaattatttaaacaattgagctgtggagctattttcacgaaaccaatt
gcttcaaagtcatatggacaaagtactgtcacttcgagctacattaagaaagaaataaaa
gatgaagagccgtctgttgactcggatgtgtcgatcaagtcagaggatgaaagtgacaat
gaagggcaaagtacgcagatccaaatattaagcgactcggcaatgccagtgcaggtgtca
aagaaaaagaaaaaagtgactgccgaacagttgaaaaattgggaaacggagaaggtcaat
catttgagaaacaaataccacatccatgtgaagggatcaaatcctccggatccgctcgaa
acgttcgatgaaatgaaaacaaaatacagcatcgattctcaagtgtttgacaatttgttc
ggctgtggctacaacgttcctacacccattcagatgcaagcgattccggttatggctagt
ggtcgttctttgatggcatgtgctcaaactggatcgggtaaaacgtcggcatttctctta
cccataatcagagacttgaaaaagcctaagaaacgaggctttcgtgctgtaattttgtgt
ccaacacgagaactcgctaagcaaacgcaacgtgaatgtctacggctggtggacggtcta
ggactacgtgttcatatattgagtaaagtcaaccaggcggaaagtcggtacggtgacaaa
agtaacaagaaattcgacattctaattacaacaccaaaccgtgtctgctatctgttgaat
cagaagccggttgtgttggacttgaagagcgtaaaatggctgatattggacgaagcggat
aaactgttcgaagaaggcaaaaatggatttcgcgaacaatttgatcaaatttacaaagag
tgctcgagaccttcgataaaagtcggtctattcagtgccacttggacgaatgcagtggca
aaatggtgccgaaagaacctcaaaggttttctgaccatcaccataggccagcgaaatgcc
gccaccgatttagttgaacaggaactcgtttttgtcggaagtgaagctggtaaattgctc
gcattcagagaaatgctgcgaaagggactacaaccgccggttctagtttttgtagatagt
aaggatcgggcgcaacaactttacaaggaattaatgttcgatggcattaacattgatgtc
atacattcggatcggagtcaacaggagcgcgataatgtggtcaaagatttccgtgaaggc
aaagtgtgggtgctggtgtgtacggagataataggtcgtggcattgacttcaaaggtgtc
aatctggtggttaactatgattttccacaatcggctatctcatacattcaccgaatcggt
agaactggtcgagctggtagacgaggtagggcgataacgtattggacgcagaacgatacc
atcaatttgaagagcatcgcaaaggtcatcaaaaattccggttgtccggtgcccgaatac
atgttaacgatgaaagagcattcgaagaagacgaaaaagaagctgaaaaaaacagtccca
gaacgtgaagatattagtgtaaagcacgctgcccgaaaacatgtcaaaacgaataaattc
gacaagaaaaaggtgaatggaaaaccgattcaaaatggaaaagtgggcaaggcaaaatcg
aagacgaaatttaagaaaacaatgaaggcggagggtaaaaagatgtctgttaagagggcg
gccgatggcaaataa
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