Bradysia coprophila: 119068629
Help
Entry
119068629 CDS
T08269
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bcoo
Bradysia coprophila
Pathway
bcoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119068629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcoo03021
]
119068629
03019 Messenger RNA biogenesis [BR:
bcoo03019
]
119068629
Transcription machinery [BR:
bcoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119068629
Messenger RNA biogenesis [BR:
bcoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119068629
U7-dependent histone pre-mRNA processing factors
119068629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
119068629
NCBI-ProteinID:
XP_037028191
LinkDB
All DBs
Position
X
Genome browser
AA seq
684 aa
AA seq
DB search
MASKRKPESQIPAEESDLLLIRPLGAGQEVGRSCIMLEFKGKNIMLDCGIHPGLSGMDAL
PFVDLIEADEVDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKV
SNISTEQMLYTEADLEASMEKIETINFHEERDVMGVKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPTMKPDVLITESTYGTHIHEKREDRESRFTSLVQKIVQQG
GRCLIPVFALGRAQELLLILDEFWSQTPELQEIPIYYASSLAKKCMAVYQTYINAMNDKI
RRQIAVNNPFVFRHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFETWCTEAKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGTKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPEH
VVLVHGEQNEMLRLKSALQREYESDKNANITFHNPRNTHSVELYFRGEKTAKVMGSLAVK
RPESGDKLSGVLVKRDFKYHILAASDLSKYTDMSMSVVTQRQSIAFSGTVGGLKTLLERI
GGPGTVEILDVDTKFKVFNCIELTVDGKILIMEWQATPLSDMYADTVLASLMQTELVGNT
IKSTGTVKGTTDHFKECLIEALQDIFGENSVPKMFKGDTLTVSVNEKEAQINLSSLQVTC
PDDDNLKQMVSAAVNKLHQTLVQT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaaacggaaaccagaaagtcaaattccggctgaggaaagtgatttattgctg
atacgtccactcggagctggacaagaagtcggacgatcttgtataatgcttgagtttaag
gggaagaatattatgctcgactgtggaatacatcccggtctatccggaatggatgctttg
ccatttgttgatttaattgaagcggacgaagttgacttattatttatctcacatttccat
cttgatcattgcggtgcacttccgtggtttttacaaaagacaagtttcaagggacgctgt
ttcatgacacatgcaacgaaagccatttatcgatggatgttgtcggattacattaaagtc
agcaatatatcgacggaacaaatgttgtacaccgaagctgacctggaagcgagtatggag
aaaattgaaacaatcaatttccacgaagaacgtgacgtgatgggcgttaaattttgggcc
tacaatgctggccatgttttaggcgcggcaatgtttatgatcgaaattgccggtgtcaaa
atattgtacaccggtgatttttcgcgacaagaagatcgacatttgatggcagcagagatt
ccgaccatgaaacccgatgtattgatcaccgaatcaacgtatggtacgcacatccatgaa
aaacgcgaagaccgagaaagtcgatttacgtcgctggtgcagaaaatcgtgcaacaaggc
ggccgttgcttgattccagtatttgcgttgggcagagctcaggaactgttgctgatactg
gacgagttttggagtcagacgccggaattgcaagaaattccaatttattatgcatcgtcg
ctggcaaagaaatgtatggctgtgtatcagacttacatcaatgcaatgaacgataaaatt
cgccgacaaattgccgtcaataatccattcgttttccggcacatatccaatctgaagggc
attgatcatttcgaagacattggaccgtgtgttgtgatggcatcacctggtatgatgcag
agcggtttatctcgtgaactatttgagacatggtgcacagaagctaagaatggcgtaatc
attgctggctactgtgtggaaggtacattggcgaaaacgattctatccgaaccggaagag
ataaccacaatgtccggaacgaagctacctctaaacatgtccgtcgactatatatccttt
tcggcgcacaccgactaccaacagacgagtgaatttattcgcttgctgaaaccggaacat
gttgtgctcgtgcatggtgaacagaatgaaatgttacgtttaaagtcagccttgcagcgg
gaatatgagtcggacaaaaatgccaacatcacattccataatccacgaaacacgcacagc
gttgaactgtattttaggggtgagaaaacggccaaagttatgggaagtttagctgttaag
cgaccggaatctggagacaaattgtccggtgttttagtgaaacgcgatttcaaatatcac
atcctggctgcatccgatctatcaaaatacaccgacatgagcatgtcagttgtaacccag
cgtcagagcatcgctttttccggaacagttggtggtctgaaaacacttctcgaacgtatt
ggcggtcccggtactgtagagattctcgacgtagacactaaattcaaggtgttcaactgc
attgaactgacagtcgatggtaaaatactgatcatggaatggcaagcaacaccgttgagt
gacatgtatgccgatacggtgctagcgagcctaatgcaaaccgaattggtgggtaacacc
atcaaatcaacgggaacagttaaagggactaccgatcacttcaaagaatgtttgattgaa
gcgttgcaggacattttcggcgagaattccgttccgaagatgtttaagggtgacaccctg
acggtgtcggtgaatgagaaagaagctcaaatcaatttgtctagcctgcaagttacctgt
ccggatgatgacaacctgaaacaaatggtatcagcagctgtgaataaattgcaccagaca
ttagttcaaacataa
DBGET
integrated database retrieval system
