Bradysia coprophila: 119069125
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Entry
119069125 CDS
T08269
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
bcoo
Bradysia coprophila
Brite
KEGG Orthology (KO) [BR:
bcoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bcoo03036
]
119069125
Enzymes [BR:
bcoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119069125
Chromosome and associated proteins [BR:
bcoo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119069125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
ResIII
Helicase_C
SNRNP200_wHTH
DEXQc_Suv3
AAA_30
AAA_22
T2SSE
AAA_19
HemN_C
nSTAND3
EAD5
UvrD-helicase
AAA_11
Motif
Other DBs
NCBI-GeneID:
119069125
NCBI-ProteinID:
XP_037028918
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Position
X
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AA seq
1356 aa
AA seq
DB search
MQRSVQEIPSKYRHIFEKFANFNRMQSEIIDKVLQTDKSIVVSAPTGSGKTVILELAIVR
LLRKIDEAANKDEFKIIYIAPIKALCNEITADWKLKFDQLGVLCGSVTGDDNDFDLNTSK
FSIIVTTPEKFDSLSRKWNACDYMRAIKLLMIDEVHLLNEDKRGPILEAVVSRMKTTRLK
LNQQNDSTDRIRFIAVSATIPNIDDLASWLDDKDNTICHKVSEDLRPVKLERHVLGYPYY
NSTPFRFDMSLTYKLPPIIEKYSNNKPALIFCNSRRSAEMGATTIIDKVRLNLSDEQRQK
ILTLSSQIEDVKLRKTVSSGVAFHHAGLCVSDKKLIEEYFRSASLPILFSTNTLAMGVNL
PAYLTVIKSTEMLVSGAVHELSEAVVLQMIGRAGRPQFDDHGVAVIMTQSTKVNKYESLI
SGTAPIESHLHNHLIEHLNSEIVSQTMSNMDLVAHWIRSSYLYIRAIKKPLHYGFPANAT
VETVEQRLQELCVTAIEELKKYGLVIETNSSLRATQLGRLMAHFYLNFETMKHFTTITGT
ENVQEIFGTLITCPDFSNGYHLRMNDKKFLNALNKSSPENDCIRFPIQGKVKTVTDKISC
LMQAVLGNIPVNDSSITEEASQLIKLGQRIGRALQEYIAILDTKNNFSALTSILLLLKGL
HANLWENSTYVFKQFNKIGHVYSKVLATNGKTTFESILNSTPSDIEMILKKRPPFGKDFL
DGVIILPQFTLNVNVKREEKQIYIVVEQVNPKFVCDSSSRGITLIVGDSTNETLFVDHRV
QYFLGKYGKFERSFSLKNPSASTVTAHLIHNGIVGLDKSETINLRPDERSLPIQVPEPIQ
TTAPILVSAPKRKSAEKPQTKRQTKQRKISDYLAPPNSTPKQAQKRKANTKSNGKKAKSS
QDECDRQMALMENDGIGVIDLTEVNNPPDAVDTSNDITEYNRAVGNNRITTNTKQSAIDF
LQKFKMPTKGVFKFVQPPKTLQNLSQVQREDSSLCVSDATVGGSEDLLSPISDLPGNQLP
AIHNVRSNSFPKAMVNDRSRQEVNEADCSSDTRNRTKSTNLQDEPKTIESNDDNKNVYVP
SCIKAMFGSQSQTIPSRVQIQSEKTMPKKKDINFSYNHLLKPIEKTVTSPNSQNYSLCDV
IEEQHKLHRTPATRQSPAFPFHDFYIHNFSAAKELERIDRISHASKDVSVNEGFFFSLEY
DALPSSYEFLTETTQTKDQPMRPLQPTKITGKTTPMTLNEHKYSKQSYFHKKLQMPQLST
AGPSTHHPPLKVAPQVPQSPFLPQYYSYSKGVSKVSGGESRSFFTEPTDPFMNDDWFEST
SRRSQQKPTSSIFSQIDYGSSSHQGGFIPSQSRFHW
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatcagtacaagaaatcccgagcaagtatcgacacatattcgaaaaatttgct
aattttaatcgaatgcaatcggaaataatcgataaagttcttcaaacagataaatcgatt
gtggtgagcgccccaacagggtctggaaagactgtaattttggaactggcaatcgttcga
ttgctgagaaaaatcgacgaggccgccaacaaagacgaatttaagataatttacattgcg
ccaatcaaagccctgtgcaatgaaattaccgctgactggaaattaaaatttgatcaactg
ggtgtgctctgtggatcggtaacgggtgacgataacgattttgatttgaacacatcaaag
tttagcattattgtcacaacgccggagaaatttgattcattgagtcggaaatggaacgct
tgtgattatatgagagccatcaagttgctgatgattgatgaggttcatctgctcaacgag
gacaaacgagggcctattctcgaagcggttgtgtcgcgtatgaaaactactcgactgaaa
ttgaaccagcagaatgattcgaccgatcgaattagatttattgcagtgtcggcaaccatt
cccaacattgatgatctggcatcatggttggacgacaaggataatacaatttgccataaa
gtgtctgaggacttacgccccgtcaaattggaacggcacgttcttggctatccgtattac
aattcaacgccgtttcgttttgacatgagcctcacatacaagcttccaccaatcatcgag
aaatactcgaacaataagcccgccctgatcttctgcaattcacggcgtagtgctgaaatg
ggtgcaacaaccatcatcgacaaggtacgattgaatttgtccgacgaacaacggcaaaaa
atactgacattatccagtcaaattgaagacgtaaaactgcgtaagacggtatcgagtggg
gtcgctttccaccatgctggtttatgcgtcagcgataagaaattgattgaggaatacttt
cggtcggcgtcgctaccaattctcttttcaacaaatacattggccatgggagtcaattta
cccgcatacctgaccgttatcaaatcgacagagatgctggtgtctggagccgttcatgaa
ctgtcagaggctgttgttttacaaatgatcggtagagctggccgaccgcagttcgatgat
catggcgttgctgttattatgactcaaagtaccaaagtgaacaagtacgagagtttgatc
agtggcactgcaccaatcgaatcccatctacataaccatttaatcgagcatttgaattcg
gaaatcgtttcgcagaccatgtccaatatggatttggtggcccattggattcgctcgtct
tatttgtacattagagcgattaagaaaccgctacattatggtttcccggcgaatgcaacg
gtcgaaacggtagaacagaggttgcaagaactgtgcgtaacagccatagaagagctgaaa
aaatatggtctggtgatagaaacgaattcttcgttgagggctactcaacttggtcgactg
atggcacatttttacttgaactttgaaactatgaaacatttcacaacgatcacaggcaca
gagaatgtacaggaaattttcgggacactgatcacgtgccctgatttttccaatggatac
catcttcgaatgaatgacaaaaaattcttgaacgctttgaacaaaagctcaccagaaaac
gattgcattcggttccccattcagggaaaagtaaagactgtcaccgacaaaatttcatgc
ttgatgcaagctgtattaggtaatattcccgtcaacgactcgtctattaccgaagaagct
tctcaactgatcaaactcggtcaacggatcggacgtgcattacaggagtatattgctatt
ttggatacaaagaataacttttctgcgttaacatcgattctgctgttgctgaagggtctt
cacgctaatttatgggaaaattcaacgtacgtgttcaagcaattcaataaaattggtcac
gtttattcaaaggttctagctacgaacggaaaaactaccttcgagtccattttaaactcg
acaccgagcgacattgaaatgatcttgaaaaaacgcccacctttcggaaaggactttctc
gatggcgtcataattctaccacaatttaccttaaatgtaaatgtgaaacgagaggagaaa
caaatttatatcgttgtcgaacaggttaatccgaaattcgtgtgtgattcatcgagtaga
gggattacacttatcgtcggtgattcgacaaatgagacactgttcgtggaccatcgagtg
cagtactttttgggtaaatacggaaaatttgaacggtctttttctctcaaaaatccttca
gcgtctacagttactgctcatttgattcacaatggaattgttggtttggacaaatcggaa
accattaatttgcgcccagatgaacgatcattgccaattcaagtacccgaacccattcag
actacagcacccattttggtttcagcaccgaaaagaaaatctgctgagaagcctcagact
aaacgtcagactaagcaacggaaaatttccgactacctggcacctccgaatagtactccg
aaacaagcccaaaaacgtaaagccaacaccaaatcaaatggaaagaaggcgaaaagtagc
caggatgaatgcgacagacaaatggcattgatggaaaatgatggtattggcgttatcgac
ttgactgaagtcaacaatccaccggatgcagtcgacacatccaacgatataacagaatac
aatcgagcggtcgggaataatcgaattactaccaacacaaaacagagcgcgattgatttt
ctacaaaaatttaaaatgcccacgaagggagtcttcaagtttgtacaaccgccaaagaca
ttacaaaatttaagccaggtccagcgtgaggatagcagtttgtgtgtgagtgacgctaca
gttggtggaagcgaagatttgttgagtccgatatcagacttaccggggaatcagttgcca
gcgatacataatgttcggagtaattcgttcccaaaagcgatggtcaatgaccgcagcaga
caagaagtaaatgaagctgattgttcctcggatacacgaaatagaaccaaaagcacgaac
ctccaagatgagcccaaaacaattgaaagtaacgacgacaataaaaacgtttatgtgccc
agctgcatcaaggccatgttcggaagccaaagtcaaacgattccatcacgagttcaaata
cagtcggagaaaactatgcccaaaaagaaggacattaatttcagttacaatcatctcttg
aaaccaatcgaaaagactgtaacttctccgaattcccaaaattattcattgtgcgatgtt
attgaagaacaacataaattgcaccgaacgccagcgacccgacaatctccagcatttcct
ttccacgacttttacatacacaatttttctgctgcaaaagaattggaaagaattgaccga
attagccacgcaagcaaggacgtcagtgttaatgaaggatttttcttctcgctggaatat
gacgcactcccatcatcatacgaatttcttaccgaaacgactcaaacaaaggatcaaccg
atgcgtcccttgcaaccgacaaagataaccggcaaaacaacgccaatgacattgaacgaa
cataagtactcgaaacagagctactttcataaaaaattgcagatgccacaattatccaca
gctggtccatccactcatcatcccccactgaaggtcgctccgcaggtcccacaaagtccg
tttttgccgcaatattacagctactcgaaaggagtatcaaaagtatctggtggagaaagt
cgttcatttttcacagaaccgaccgatcctttcatgaatgatgactggtttgaatcgacg
agtcgacgatctcaacaaaaaccaacgtcctctatattttctcaaattgactatggttct
tcatcccatcaggggggtttcattccgtcccagtcgagatttcattggtag
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